Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCNT1O60563 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CCNT1O60563 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CCNT1O60563 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.43■■□□□ 1.82
CCNT1O60563 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.43■■□□□ 1.82
CCNT1O60563 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.43■■□□□ 1.82
CCNT1O60563 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CCNT1O60563 AL451085.2-201ENST00000605085 799 ntBASIC26.42■■□□□ 1.82
CCNT1O60563 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.41■■□□□ 1.82
CCNT1O60563 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.41■■□□□ 1.82
CCNT1O60563 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCNT1O60563 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CCNT1O60563 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCNT1O60563 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCNT1O60563 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCNT1O60563 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCNT1O60563 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.4■■□□□ 1.82
CCNT1O60563 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCNT1O60563 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.4■■□□□ 1.82
CCNT1O60563 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.4■■□□□ 1.82
CCNT1O60563 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCNT1O60563 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.39■■□□□ 1.82
CCNT1O60563 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCNT1O60563 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCNT1O60563 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
CCNT1O60563 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.39■■□□□ 1.81
CCNT1O60563 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.39■■□□□ 1.81
CCNT1O60563 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.39■■□□□ 1.81
CCNT1O60563 LINC01124-201ENST00000409786 2117 ntBASIC26.38■■□□□ 1.81
CCNT1O60563 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCNT1O60563 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.38■■□□□ 1.81
CCNT1O60563 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCNT1O60563 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.38■■□□□ 1.81
CCNT1O60563 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.38■■□□□ 1.81
CCNT1O60563 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCNT1O60563 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CCNT1O60563 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCNT1O60563 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CCNT1O60563 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CCNT1O60563 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
CCNT1O60563 AF131216.4-201ENST00000638924 1588 ntBASIC26.37■■□□□ 1.81
CCNT1O60563 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCNT1O60563 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCNT1O60563 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCNT1O60563 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CCNT1O60563 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
CCNT1O60563 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCNT1O60563 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCNT1O60563 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCNT1O60563 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCNT1O60563 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCNT1O60563 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CCNT1O60563 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.36■■□□□ 1.81
CCNT1O60563 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.35■■□□□ 1.81
CCNT1O60563 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCNT1O60563 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCNT1O60563 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.35■■□□□ 1.81
CCNT1O60563 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.35■■□□□ 1.81
CCNT1O60563 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
CCNT1O60563 AC009299.2-201ENST00000482477 511 ntBASIC26.35■■□□□ 1.81
CCNT1O60563 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCNT1O60563 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CCNT1O60563 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.35■■□□□ 1.81
CCNT1O60563 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.35■■□□□ 1.81
CCNT1O60563 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.35■■□□□ 1.81
CCNT1O60563 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCNT1O60563 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.34■■□□□ 1.81
CCNT1O60563 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
CCNT1O60563 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCNT1O60563 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCNT1O60563 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCNT1O60563 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CCNT1O60563 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
CCNT1O60563 AC137630.3-201ENST00000607245 391 ntBASIC26.33■■□□□ 1.81
CCNT1O60563 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCNT1O60563 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.33■■□□□ 1.81
CCNT1O60563 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNT1O60563 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCNT1O60563 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNT1O60563 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.32■■□□□ 1.8
CCNT1O60563 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNT1O60563 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCNT1O60563 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCNT1O60563 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCNT1O60563 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCNT1O60563 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
CCNT1O60563 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.3■■□□□ 1.8
CCNT1O60563 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCNT1O60563 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CCNT1O60563 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCNT1O60563 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.3■■□□□ 1.8
CCNT1O60563 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNT1O60563 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNT1O60563 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNT1O60563 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.29■■□□□ 1.8
CCNT1O60563 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNT1O60563 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.29■■□□□ 1.8
CCNT1O60563 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCNT1O60563 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNT1O60563 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms