Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 BHLHE23-202ENST00000612929 1109 ntBASIC21.19■□□□□ 0.98
ZC3H12DA2A288 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H12DA2A288 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H12DA2A288 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H12DA2A288 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H12DA2A288 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3H12DA2A288 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.17■□□□□ 0.98
ZC3H12DA2A288 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H12DA2A288 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ZC3H12DA2A288 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H12DA2A288 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.17■□□□□ 0.98
ZC3H12DA2A288 PVT1_1.1-201ENST00000615125 194 ntBASIC21.17■□□□□ 0.98
ZC3H12DA2A288 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H12DA2A288 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H12DA2A288 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3H12DA2A288 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H12DA2A288 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H12DA2A288 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3H12DA2A288 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H12DA2A288 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3H12DA2A288 AC010980.1-201ENST00000587192 1142 ntBASIC21.16■□□□□ 0.98
ZC3H12DA2A288 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H12DA2A288 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H12DA2A288 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H12DA2A288 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3H12DA2A288 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 AL592295.1-201ENST00000400984 884 ntBASIC21.15■□□□□ 0.98
ZC3H12DA2A288 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3H12DA2A288 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3H12DA2A288 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ZC3H12DA2A288 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3H12DA2A288 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.14■□□□□ 0.97
ZC3H12DA2A288 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3H12DA2A288 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.14■□□□□ 0.97
ZC3H12DA2A288 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.14■□□□□ 0.97
ZC3H12DA2A288 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.14■□□□□ 0.97
ZC3H12DA2A288 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ZC3H12DA2A288 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZC3H12DA2A288 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 LINC00543-201ENST00000567234 1845 ntBASIC21.13■□□□□ 0.97
ZC3H12DA2A288 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 AC019171.1-201ENST00000601251 1056 ntBASIC21.13■□□□□ 0.97
ZC3H12DA2A288 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.13■□□□□ 0.97
ZC3H12DA2A288 AC133561.1-201ENST00000568600 2415 ntBASIC21.13■□□□□ 0.97
ZC3H12DA2A288 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZC3H12DA2A288 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.12■□□□□ 0.97
ZC3H12DA2A288 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.12■□□□□ 0.97
ZC3H12DA2A288 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.12■□□□□ 0.97
ZC3H12DA2A288 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ZC3H12DA2A288 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZC3H12DA2A288 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H12DA2A288 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H12DA2A288 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H12DA2A288 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H12DA2A288 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H12DA2A288 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ZC3H12DA2A288 AC074183.2-201ENST00000623112 922 ntBASIC21.1■□□□□ 0.97
ZC3H12DA2A288 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H12DA2A288 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
ZC3H12DA2A288 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZC3H12DA2A288 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms