Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.93■□□□□ 0.14
CDCA3Q99618 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDCA3Q99618 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDCA3Q99618 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.93■□□□□ 0.14
CDCA3Q99618 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDCA3Q99618 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDCA3Q99618 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.93■□□□□ 0.14
CDCA3Q99618 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.93■□□□□ 0.14
CDCA3Q99618 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.93■□□□□ 0.14
CDCA3Q99618 AL358472.3-201ENST00000608147 415 ntBASIC15.93■□□□□ 0.14
CDCA3Q99618 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.93■□□□□ 0.14
CDCA3Q99618 NAP1L6-202ENST00000641404 1222 ntBASIC15.93■□□□□ 0.14
CDCA3Q99618 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDCA3Q99618 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDCA3Q99618 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.93■□□□□ 0.14
CDCA3Q99618 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDCA3Q99618 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDCA3Q99618 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDCA3Q99618 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDCA3Q99618 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CDCA3Q99618 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.92■□□□□ 0.14
CDCA3Q99618 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CDCA3Q99618 AC026316.1-201ENST00000398900 414 ntBASIC15.92■□□□□ 0.14
CDCA3Q99618 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.92■□□□□ 0.14
CDCA3Q99618 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.92■□□□□ 0.14
CDCA3Q99618 AC090857.1-201ENST00000527400 390 ntBASIC15.92■□□□□ 0.14
CDCA3Q99618 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 AL132994.2-201ENST00000603120 687 ntBASIC15.92■□□□□ 0.14
CDCA3Q99618 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 COX6A1P2-201ENST00000620597 330 ntBASIC15.92■□□□□ 0.14
CDCA3Q99618 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.92■□□□□ 0.14
CDCA3Q99618 AC002472.3-201ENST00000640124 621 ntBASIC15.92■□□□□ 0.14
CDCA3Q99618 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.92■□□□□ 0.14
CDCA3Q99618 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CDCA3Q99618 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CDCA3Q99618 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDCA3Q99618 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDCA3Q99618 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDCA3Q99618 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 RN7SKP175-201ENST00000408472 289 ntBASIC15.91■□□□□ 0.14
CDCA3Q99618 HLA-K-203ENST00000430151 1046 ntBASIC15.91■□□□□ 0.14
CDCA3Q99618 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CDCA3Q99618 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 DUX4L46-201ENST00000566845 751 ntBASIC15.91■□□□□ 0.14
CDCA3Q99618 SNORD3B-2-202ENST00000571722 791 ntBASIC15.91■□□□□ 0.14
CDCA3Q99618 MIR3147-201ENST00000577811 66 ntBASIC15.91■□□□□ 0.14
CDCA3Q99618 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.91■□□□□ 0.14
CDCA3Q99618 MIR4750-201ENST00000584564 56 ntBASIC15.91■□□□□ 0.14
CDCA3Q99618 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.91■□□□□ 0.14
CDCA3Q99618 AP003419.4-201ENST00000616071 517 ntBASIC15.91■□□□□ 0.14
CDCA3Q99618 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.91■□□□□ 0.14
CDCA3Q99618 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.91■□□□□ 0.14
CDCA3Q99618 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CDCA3Q99618 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
CDCA3Q99618 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDCA3Q99618 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CDCA3Q99618 SHC1P1-201ENST00000425230 1745 ntBASIC15.91■□□□□ 0.14
CDCA3Q99618 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CDCA3Q99618 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDCA3Q99618 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms