Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 TUBB8P8-201ENST00000458717 1058 ntBASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 NAP1L6-202ENST00000641404 1222 ntBASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 RN7SKP214-201ENST00000364208 315 ntBASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 AC073150.1-201ENST00000450406 1084 ntBASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 AC068587.8-201ENST00000641239 219 ntBASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.91□□□□□ -0.02
RSPO4Q2I0M5 AC148477.4-201ENST00000613430 1793 ntBASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RSPO4Q2I0M5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms