Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AL671277.2-201ENST00000458060 996 ntBASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AC139887.3-201ENST00000568585 713 ntBASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AC152010.1-201ENST00000415779 2006 ntBASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 TCAF1P1-201ENST00000414990 2232 ntBASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.17□□□□□ -0.78
SMIM11BQ8TCY0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 AP005117.1-201ENST00000584346 1413 ntBASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 AK4P3-201ENST00000418260 669 ntBASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 GGTLC5P-201ENST00000617623 998 ntBASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMIM11BQ8TCY0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMIM11BQ8TCY0 PCDHGB8P-201ENST00000502926 1973 ntBASIC10.15□□□□□ -0.78
SMIM11BQ8TCY0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMIM11BQ8TCY0 GALC-206ENST00000544807 2528 ntTSL 2 BASIC10.15□□□□□ -0.78
SMIM11BQ8TCY0 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.15□□□□□ -0.78
SMIM11BQ8TCY0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMIM11BQ8TCY0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMIM11BQ8TCY0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC10.15□□□□□ -0.78
SMIM11BQ8TCY0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms