Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 AC006486.2-201ENST00000624246 2199 ntBASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.08□□□□□ -0.32
FAM90A1Q86YD7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 GHSR-202ENST00000427970 912 ntBASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 AC190387.1-201ENST00000551683 408 ntBASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 RRP7BP-205ENST00000566851 833 ntBASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 MIR3197-201ENST00000582241 73 ntBASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 AC099568.2-201ENST00000609194 695 ntBASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 AC148477.4-201ENST00000613430 1793 ntBASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 AL391825.1-201ENST00000457671 1364 ntBASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FAM90A1Q86YD7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FAM90A1Q86YD7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms