Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.15■□□□□ 0.18
LRRC38Q5VT99 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC38Q5VT99 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC38Q5VT99 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 AC092580.3-201ENST00000430932 139 ntBASIC16.14■□□□□ 0.17
LRRC38Q5VT99 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 AC092337.1-201ENST00000568699 1129 ntBASIC16.14■□□□□ 0.17
LRRC38Q5VT99 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.14■□□□□ 0.17
LRRC38Q5VT99 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC38Q5VT99 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 AC114501.2-201ENST00000439631 535 ntBASIC16.13■□□□□ 0.17
LRRC38Q5VT99 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 AC044860.1-202ENST00000559481 777 ntBASIC16.13■□□□□ 0.17
LRRC38Q5VT99 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 AL691403.2-201ENST00000618460 490 ntBASIC16.13■□□□□ 0.17
LRRC38Q5VT99 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
LRRC38Q5VT99 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC38Q5VT99 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms