Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHRNB2P17787 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNB2P17787 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNB2P17787 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNB2P17787 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNB2P17787 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNB2P17787 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.47■□□□□ 0.23
CHRNB2P17787 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNB2P17787 AC106028.4-201ENST00000614509 607 ntBASIC16.47■□□□□ 0.23
CHRNB2P17787 AL645728.2-202ENST00000641679 227 ntBASIC16.47■□□□□ 0.23
CHRNB2P17787 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CHRNB2P17787 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.47■□□□□ 0.23
CHRNB2P17787 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CHRNB2P17787 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNB2P17787 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHRNB2P17787 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNB2P17787 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNB2P17787 REXO1L4P-201ENST00000605109 1937 ntBASIC16.47■□□□□ 0.23
CHRNB2P17787 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 FGD5P1-202ENST00000614866 2498 ntBASIC16.46■□□□□ 0.23
CHRNB2P17787 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHRNB2P17787 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNB2P17787 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNB2P17787 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNB2P17787 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.46■□□□□ 0.23
CHRNB2P17787 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNB2P17787 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CHRNB2P17787 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
CHRNB2P17787 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.46■□□□□ 0.23
CHRNB2P17787 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 SRD5A3P1-201ENST00000603021 949 ntBASIC16.46■□□□□ 0.23
CHRNB2P17787 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CHRNB2P17787 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNB2P17787 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNB2P17787 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNB2P17787 CLK3P2-201ENST00000427566 1453 ntBASIC16.46■□□□□ 0.23
CHRNB2P17787 BTBD7P1-201ENST00000447253 1453 ntBASIC16.46■□□□□ 0.23
CHRNB2P17787 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNB2P17787 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNB2P17787 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNB2P17787 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNB2P17787 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNB2P17787 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNB2P17787 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNB2P17787 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNB2P17787 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNB2P17787 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNB2P17787 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CHRNB2P17787 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CHRNB2P17787 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CHRNB2P17787 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHRNB2P17787 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHRNB2P17787 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 MEIS3P1-201ENST00000495167 958 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms