Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.29■□□□□ 0.04
DLX3O60479 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.29■□□□□ 0.04
DLX3O60479 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.29■□□□□ 0.04
DLX3O60479 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
DLX3O60479 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
DLX3O60479 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.29■□□□□ 0.04
DLX3O60479 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
DLX3O60479 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
DLX3O60479 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.29■□□□□ 0.04
DLX3O60479 GHSR-202ENST00000427970 912 ntBASIC15.29■□□□□ 0.04
DLX3O60479 RBPMS2P1-201ENST00000437762 623 ntBASIC15.29■□□□□ 0.04
DLX3O60479 SPDYE14P-201ENST00000442619 822 ntBASIC15.29■□□□□ 0.04
DLX3O60479 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
DLX3O60479 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.29■□□□□ 0.04
DLX3O60479 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
DLX3O60479 AC007967.4-201ENST00000614700 386 ntBASIC15.29■□□□□ 0.04
DLX3O60479 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
DLX3O60479 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
DLX3O60479 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.29■□□□□ 0.04
DLX3O60479 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.29■□□□□ 0.04
DLX3O60479 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DLX3O60479 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.28■□□□□ 0.04
DLX3O60479 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 AC140479.7-201ENST00000636301 2332 ntBASIC15.28■□□□□ 0.04
DLX3O60479 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.28■□□□□ 0.04
DLX3O60479 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
DLX3O60479 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.28■□□□□ 0.04
DLX3O60479 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.28■□□□□ 0.04
DLX3O60479 AC026150.2-201ENST00000564693 1156 ntBASIC15.28■□□□□ 0.04
DLX3O60479 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
DLX3O60479 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.28■□□□□ 0.04
DLX3O60479 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.28■□□□□ 0.04
DLX3O60479 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
DLX3O60479 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.28■□□□□ 0.04
DLX3O60479 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
DLX3O60479 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
DLX3O60479 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DLX3O60479 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DLX3O60479 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
DLX3O60479 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.27■□□□□ 0.04
DLX3O60479 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DLX3O60479 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.27■□□□□ 0.04
DLX3O60479 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.27■□□□□ 0.04
DLX3O60479 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DLX3O60479 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DLX3O60479 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
DLX3O60479 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
DLX3O60479 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DLX3O60479 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DLX3O60479 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
DLX3O60479 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DLX3O60479 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DLX3O60479 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.27■□□□□ 0.04
DLX3O60479 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DLX3O60479 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms