Protein–RNA interactions for Protein: P0DI80

SMIM6, Small integral membrane protein 6, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM6P0DI80 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 AC008620.2-201ENST00000510294 1569 ntBASIC11.6□□□□□ -0.55
SMIM6P0DI80 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 UBE2DNL-204ENST00000602536 740 ntBASIC11.6□□□□□ -0.55
SMIM6P0DI80 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 CICP18-201ENST00000406017 2812 ntBASIC11.6□□□□□ -0.55
SMIM6P0DI80 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 KRT8P39-201ENST00000396270 1433 ntBASIC11.6□□□□□ -0.55
SMIM6P0DI80 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC11.6□□□□□ -0.55
SMIM6P0DI80 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM6P0DI80 FLJ30679-201ENST00000624773 1980 ntBASIC11.59□□□□□ -0.55
SMIM6P0DI80 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 AL645939.2-201ENST00000427340 991 ntBASIC11.59□□□□□ -0.55
SMIM6P0DI80 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 AC106739.1-201ENST00000617035 715 ntBASIC11.59□□□□□ -0.55
SMIM6P0DI80 BID-214ENST00000617586 542 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 AC006557.6-201ENST00000623071 864 ntBASIC11.59□□□□□ -0.55
SMIM6P0DI80 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMIM6P0DI80 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SMIM6P0DI80 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms