RNA–Protein interactions for RNA: ENST00000406017.3

CICP18-201, Transcript of capicua transcriptional repressor pseudogene 18, humanhuman

BASIC

Gene CICP18, Length 2,812 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CICP18-201ENST00000406017 NISCHQ9Y2I1 1504 aa27.01■■□□□ 1.91
CICP18-201ENST00000406017 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
CICP18-201ENST00000406017 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.26
CICP18-201ENST00000406017 ABCC9O60706 1549 aa22.64■■□□□ 1.22
CICP18-201ENST00000406017 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
CICP18-201ENST00000406017 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
CICP18-201ENST00000406017 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.17
CICP18-201ENST00000406017 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.17
CICP18-201ENST00000406017 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
CICP18-201ENST00000406017 NACADO15069 1562 aa22.13■■□□□ 1.13
CICP18-201ENST00000406017 RB1CC1Q8TDY2 1594 aa22■■□□□ 1.11
CICP18-201ENST00000406017 SCRIBQ14160 1630 aa21.71■■□□□ 1.07
CICP18-201ENST00000406017 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
CICP18-201ENST00000406017 UNC13AQ9UPW8 1703 aa21.48■■□□□ 1.03
CICP18-201ENST00000406017 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
CICP18-201ENST00000406017 BICRAQ9NZM4 1560 aa21.32■■□□□ 1
CICP18-201ENST00000406017 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
CICP18-201ENST00000406017 LOC105371045A0A1W2PR82 267 aa21.01■□□□□ 0.95
CICP18-201ENST00000406017 HRCP23327 699 aa21.01■□□□□ 0.95
CICP18-201ENST00000406017 CECR2Q9BXF3 1484 aa21■□□□□ 0.95
CICP18-201ENST00000406017 PCGF6Q9BYE7 350 aa20.96■□□□□ 0.95
CICP18-201ENST00000406017 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
CICP18-201ENST00000406017 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
CICP18-201ENST00000406017 PELP1Q8IZL8 1130 aaKnown RBP20.82■□□□□ 0.92
CICP18-201ENST00000406017 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
CICP18-201ENST00000406017 SMARCA4P51532 1647 aa20.8■□□□□ 0.92
CICP18-201ENST00000406017 FAM9AQ8IZU1 332 aaPredicted RBP20.73■□□□□ 0.91
CICP18-201ENST00000406017 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
CICP18-201ENST00000406017 WIZO95785 1651 aa20.7■□□□□ 0.9
CICP18-201ENST00000406017 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
CICP18-201ENST00000406017 PPARGC1BQ86YN6 1023 aaKnown RBP20.62■□□□□ 0.89
CICP18-201ENST00000406017 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
CICP18-201ENST00000406017 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
CICP18-201ENST00000406017 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
CICP18-201ENST00000406017 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
CICP18-201ENST00000406017 CC2D2AQ9P2K1 1620 aa20.47■□□□□ 0.87
CICP18-201ENST00000406017 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
CICP18-201ENST00000406017 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
CICP18-201ENST00000406017 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
CICP18-201ENST00000406017 HMGXB3Q12766 1538 aa20.36■□□□□ 0.85
CICP18-201ENST00000406017 CCDC88BA6NC98 1476 aa20.28■□□□□ 0.84
CICP18-201ENST00000406017 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
CICP18-201ENST00000406017 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
CICP18-201ENST00000406017 ABCC8Q09428 1581 aa20.22■□□□□ 0.83
CICP18-201ENST00000406017 MYT1Q01538 1121 aa20.12■□□□□ 0.81
CICP18-201ENST00000406017 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
CICP18-201ENST00000406017 SOGA1O94964 1423 aa20.01■□□□□ 0.79
CICP18-201ENST00000406017 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
CICP18-201ENST00000406017 TTBK1Q5TCY1 1321 aaPredicted RBP19.91■□□□□ 0.78
CICP18-201ENST00000406017 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
CICP18-201ENST00000406017 CFTRP13569 1480 aa19.9■□□□□ 0.78
CICP18-201ENST00000406017 UBTFP17480 764 aaKnown RBP19.89■□□□□ 0.77
CICP18-201ENST00000406017 CSRNP3Q8WYN3 585 aa19.89■□□□□ 0.77
CICP18-201ENST00000406017 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
CICP18-201ENST00000406017 EEA1Q15075 1411 aa19.87■□□□□ 0.77
CICP18-201ENST00000406017 CEP162Q5TB80 1403 aa19.83■□□□□ 0.77
CICP18-201ENST00000406017 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.76
CICP18-201ENST00000406017 NESP48681 1621 aa19.78■□□□□ 0.76
CICP18-201ENST00000406017 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
CICP18-201ENST00000406017 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
CICP18-201ENST00000406017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
CICP18-201ENST00000406017 CCER1Q8TC90 406 aaPredicted RBP19.72■□□□□ 0.75
CICP18-201ENST00000406017 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
CICP18-201ENST00000406017 GOLGA3Q08378 1498 aa19.71■□□□□ 0.75
CICP18-201ENST00000406017 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
CICP18-201ENST00000406017 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
CICP18-201ENST00000406017 RANGAP1P46060 587 aaPredicted RBP19.64■□□□□ 0.73
CICP18-201ENST00000406017 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
CICP18-201ENST00000406017 KIF21BO75037 1637 aa19.54■□□□□ 0.72
CICP18-201ENST00000406017 RAPGEF2Q9Y4G8 1499 aa19.51■□□□□ 0.71
CICP18-201ENST00000406017 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
CICP18-201ENST00000406017 CUX1P39880 1505 aa19.5■□□□□ 0.71
CICP18-201ENST00000406017 CLIP1P30622 1438 aa19.5■□□□□ 0.71
CICP18-201ENST00000406017 TOP2BQ02880 1626 aa19.49■□□□□ 0.71
CICP18-201ENST00000406017 ERCC6Q03468 1493 aa19.46■□□□□ 0.71
CICP18-201ENST00000406017 BIVM-ERCC5R4GMW8 1640 aa19.46■□□□□ 0.71
CICP18-201ENST00000406017 DNMBPQ6XZF7 1577 aa19.42■□□□□ 0.7
CICP18-201ENST00000406017 URB2Q14146 1524 aaKnown RBP19.42■□□□□ 0.7
CICP18-201ENST00000406017 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
CICP18-201ENST00000406017 ACIN1Q9UKV3 1341 aaKnown RBP19.4■□□□□ 0.7
CICP18-201ENST00000406017 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
CICP18-201ENST00000406017 VPS8Q8N3P4 1428 aa19.4■□□□□ 0.7
CICP18-201ENST00000406017 APLP2Q06481 763 aa19.38■□□□□ 0.69
CICP18-201ENST00000406017 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
CICP18-201ENST00000406017 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
CICP18-201ENST00000406017 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
CICP18-201ENST00000406017 DIEXFQ68CQ4 756 aaKnown RBP19.33■□□□□ 0.69
CICP18-201ENST00000406017 GTF3C3Q9Y5Q9 886 aa19.3■□□□□ 0.68
CICP18-201ENST00000406017 POLA1P09884 1462 aaPredicted RBP19.3■□□□□ 0.68
CICP18-201ENST00000406017 WDR62O43379 1518 aa19.29■□□□□ 0.68
CICP18-201ENST00000406017 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
CICP18-201ENST00000406017 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.68
CICP18-201ENST00000406017 PRXQ9BXM0 1461 aa19.27■□□□□ 0.68
CICP18-201ENST00000406017 ERICH3Q5RHP9 1530 aa19.24■□□□□ 0.67
CICP18-201ENST00000406017 RAD54L2Q9Y4B4 1467 aa19.23■□□□□ 0.67
CICP18-201ENST00000406017 ZNF316A6NFI3 1004 aaPredicted RBP19.21■□□□□ 0.67
CICP18-201ENST00000406017 CUX2O14529 1486 aa19.18■□□□□ 0.66
CICP18-201ENST00000406017 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
CICP18-201ENST00000406017 ARAP1Q96P48 1450 aa19.15■□□□□ 0.66
CICP18-201ENST00000406017 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms