Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 MIR6069-201ENST00000620069 79 ntBASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SNX18-202ENST00000343017 3140 ntBASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC009477.1-201ENST00000452936 217 ntBASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC135586.1-201ENST00000539323 574 ntBASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC190387.1-201ENST00000551683 408 ntBASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AL844908.2-201ENST00000609461 460 ntBASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AL033527.5-202ENST00000641632 1098 ntBASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 CYP4F24P-201ENST00000586049 1580 ntBASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 CDC14C-201ENST00000428251 1719 ntBASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AC069224.1-201ENST00000566372 1715 ntBASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PCGF1Q9BSM1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PCGF1Q9BSM1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms