Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF2Q99805 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF2Q99805 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF2Q99805 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.59□□□□□ -0.07
TM9SF2Q99805 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF2Q99805 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TM9SF2Q99805 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF2Q99805 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TM9SF2Q99805 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.58□□□□□ -0.07
TM9SF2Q99805 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.58□□□□□ -0.07
TM9SF2Q99805 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TM9SF2Q99805 AL137784.3-201ENST00000623858 2288 ntBASIC14.58□□□□□ -0.08
TM9SF2Q99805 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 AC027369.6-201ENST00000525520 931 ntBASIC14.58□□□□□ -0.08
TM9SF2Q99805 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 AL109954.1-202ENST00000564051 2148 ntBASIC14.58□□□□□ -0.08
TM9SF2Q99805 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.58□□□□□ -0.08
TM9SF2Q99805 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF2Q99805 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF2Q99805 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 AC020658.6-201ENST00000623564 1870 ntBASIC14.57□□□□□ -0.08
TM9SF2Q99805 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 AC106881.1-201ENST00000605849 3329 ntBASIC14.57□□□□□ -0.08
TM9SF2Q99805 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 HLA-V-204ENST00000476601 1289 ntBASIC14.57□□□□□ -0.08
TM9SF2Q99805 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.57□□□□□ -0.08
TM9SF2Q99805 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TM9SF2Q99805 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF2Q99805 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.56□□□□□ -0.08
TM9SF2Q99805 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF2Q99805 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF2Q99805 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.56□□□□□ -0.08
TM9SF2Q99805 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF2Q99805 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF2Q99805 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TM9SF2Q99805 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF2Q99805 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF2Q99805 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF2Q99805 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TM9SF2Q99805 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms