Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.98□□□□□ -0.01
VSX2P58304 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.98□□□□□ -0.01
VSX2P58304 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.98□□□□□ -0.01
VSX2P58304 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VSX2P58304 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VSX2P58304 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VSX2P58304 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VSX2P58304 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VSX2P58304 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
VSX2P58304 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.98□□□□□ -0.01
VSX2P58304 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.98□□□□□ -0.01
VSX2P58304 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VSX2P58304 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.98□□□□□ -0.01
VSX2P58304 AC092127.1-201ENST00000567093 3455 ntBASIC14.98□□□□□ -0.01
VSX2P58304 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
VSX2P58304 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VSX2P58304 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VSX2P58304 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
VSX2P58304 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VSX2P58304 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VSX2P58304 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.97□□□□□ -0.01
VSX2P58304 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 AC098850.1-201ENST00000419919 790 ntBASIC14.97□□□□□ -0.01
VSX2P58304 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.97□□□□□ -0.01
VSX2P58304 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.97□□□□□ -0.01
VSX2P58304 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.97□□□□□ -0.01
VSX2P58304 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.97□□□□□ -0.01
VSX2P58304 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
VSX2P58304 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.97□□□□□ -0.01
VSX2P58304 AL391069.4-201ENST00000609583 481 ntBASIC14.97□□□□□ -0.01
VSX2P58304 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.97□□□□□ -0.01
VSX2P58304 MIR8072-201ENST00000614241 80 ntBASIC14.97□□□□□ -0.01
VSX2P58304 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.97□□□□□ -0.01
VSX2P58304 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VSX2P58304 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.97□□□□□ -0.01
VSX2P58304 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
VSX2P58304 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.97□□□□□ -0.01
VSX2P58304 AL121723.1-201ENST00000445194 1519 ntBASIC14.97□□□□□ -0.01
VSX2P58304 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.97□□□□□ -0.01
VSX2P58304 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VSX2P58304 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VSX2P58304 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.01
VSX2P58304 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.96□□□□□ -0.01
VSX2P58304 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.96□□□□□ -0.01
VSX2P58304 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.96□□□□□ -0.01
VSX2P58304 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.96□□□□□ -0.01
VSX2P58304 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VSX2P58304 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
VSX2P58304 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.96□□□□□ -0.01
VSX2P58304 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.96□□□□□ -0.01
VSX2P58304 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 KRT18P43-201ENST00000469825 1281 ntBASIC14.96□□□□□ -0.01
VSX2P58304 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.96□□□□□ -0.01
VSX2P58304 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
VSX2P58304 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VSX2P58304 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.96□□□□□ -0.01
VSX2P58304 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
VSX2P58304 AL358472.5-202ENST00000641448 1267 ntBASIC14.96□□□□□ -0.01
VSX2P58304 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VSX2P58304 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VSX2P58304 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VSX2P58304 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VSX2P58304 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VSX2P58304 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.96□□□□□ -0.02
VSX2P58304 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
VSX2P58304 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.96□□□□□ -0.02
VSX2P58304 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VSX2P58304 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VSX2P58304 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms