Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN20P56880 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN20P56880 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLDN20P56880 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN20P56880 REXO1L1P-202ENST00000608646 1974 ntBASIC14.37□□□□□ -0.11
CLDN20P56880 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN20P56880 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CLDN20P56880 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 FO393414.2-201ENST00000405153 598 ntBASIC14.37□□□□□ -0.11
CLDN20P56880 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN20P56880 EEF1DP4-201ENST00000446006 880 ntBASIC14.37□□□□□ -0.11
CLDN20P56880 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN20P56880 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN20P56880 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CLDN20P56880 RN7SL204P-201ENST00000582831 262 ntBASIC14.37□□□□□ -0.11
CLDN20P56880 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.37□□□□□ -0.11
CLDN20P56880 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN20P56880 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN20P56880 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN20P56880 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN20P56880 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN20P56880 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN20P56880 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.37□□□□□ -0.11
CLDN20P56880 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLDN20P56880 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLDN20P56880 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 AP003680.1-201ENST00000598970 3660 ntBASIC14.36□□□□□ -0.11
CLDN20P56880 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 AC018892.3-201ENST00000623986 2499 ntBASIC14.36□□□□□ -0.11
CLDN20P56880 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN20P56880 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CLDN20P56880 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN20P56880 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 AC236430.1-201ENST00000402231 743 ntBASIC14.36□□□□□ -0.11
CLDN20P56880 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN20P56880 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.36□□□□□ -0.11
CLDN20P56880 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.36□□□□□ -0.11
CLDN20P56880 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN20P56880 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN20P56880 AC004840.1-201ENST00000636359 365 ntBASIC14.36□□□□□ -0.11
CLDN20P56880 AL109936.8-201ENST00000641772 604 ntBASIC14.36□□□□□ -0.11
CLDN20P56880 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
CLDN20P56880 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN20P56880 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN20P56880 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN20P56880 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN20P56880 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLDN20P56880 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN20P56880 AC069224.1-201ENST00000566372 1715 ntBASIC14.35□□□□□ -0.11
CLDN20P56880 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN20P56880 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN20P56880 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms