Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
XRCC2O43543 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
XRCC2O43543 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 AL080243.2-201ENST00000418783 582 ntBASIC13.63□□□□□ -0.23
XRCC2O43543 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.63□□□□□ -0.23
XRCC2O43543 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.63□□□□□ -0.23
XRCC2O43543 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.63□□□□□ -0.23
XRCC2O43543 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.63□□□□□ -0.23
XRCC2O43543 HLA-V-204ENST00000476601 1289 ntBASIC13.63□□□□□ -0.23
XRCC2O43543 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.63□□□□□ -0.23
XRCC2O43543 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.63□□□□□ -0.23
XRCC2O43543 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.63□□□□□ -0.23
XRCC2O43543 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
XRCC2O43543 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
XRCC2O43543 AL691403.2-201ENST00000618460 490 ntBASIC13.63□□□□□ -0.23
XRCC2O43543 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
XRCC2O43543 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
XRCC2O43543 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
XRCC2O43543 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.62□□□□□ -0.23
XRCC2O43543 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 AC023157.3-201ENST00000619086 2088 ntBASIC13.62□□□□□ -0.23
XRCC2O43543 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.62□□□□□ -0.23
XRCC2O43543 FO538757.1-201ENST00000623083 1397 ntBASIC13.62□□□□□ -0.23
XRCC2O43543 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
XRCC2O43543 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
XRCC2O43543 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.62□□□□□ -0.23
XRCC2O43543 AC067863.1-201ENST00000494933 530 ntBASIC13.62□□□□□ -0.23
XRCC2O43543 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.62□□□□□ -0.23
XRCC2O43543 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.62□□□□□ -0.23
XRCC2O43543 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.62□□□□□ -0.23
XRCC2O43543 AL109954.1-202ENST00000564051 2148 ntBASIC13.62□□□□□ -0.23
XRCC2O43543 AC004449.1-201ENST00000564240 433 ntBASIC13.62□□□□□ -0.23
XRCC2O43543 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.62□□□□□ -0.23
XRCC2O43543 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
XRCC2O43543 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.62□□□□□ -0.23
XRCC2O43543 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.62□□□□□ -0.23
XRCC2O43543 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.62□□□□□ -0.23
XRCC2O43543 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
XRCC2O43543 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms