Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP4S1Q9Y587 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP4S1Q9Y587 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP4S1Q9Y587 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 FGFR3P6-201ENST00000457012 610 ntBASIC14.83□□□□□ -0.04
AP4S1Q9Y587 IGHV3-65-201ENST00000523210 341 ntBASIC14.83□□□□□ -0.04
AP4S1Q9Y587 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 AL732292.2-201ENST00000609649 430 ntBASIC14.83□□□□□ -0.04
AP4S1Q9Y587 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 AL645728.2-201ENST00000641974 660 ntBASIC14.83□□□□□ -0.04
AP4S1Q9Y587 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
AP4S1Q9Y587 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.82□□□□□ -0.04
AP4S1Q9Y587 AC097359.2-201ENST00000604992 2389 ntBASIC14.82□□□□□ -0.04
AP4S1Q9Y587 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 AC073621.1-201ENST00000392730 636 ntBASIC14.82□□□□□ -0.04
AP4S1Q9Y587 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 KRT18P27-201ENST00000427733 1299 ntBASIC14.82□□□□□ -0.04
AP4S1Q9Y587 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 SCARNA2-201ENST00000458748 420 ntBASIC14.82□□□□□ -0.04
AP4S1Q9Y587 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 AC093827.2-201ENST00000512654 315 ntBASIC14.82□□□□□ -0.04
AP4S1Q9Y587 AC136632.2-201ENST00000512891 861 ntBASIC14.82□□□□□ -0.04
AP4S1Q9Y587 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 AC107918.4-202ENST00000641623 219 ntBASIC14.82□□□□□ -0.04
AP4S1Q9Y587 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP4S1Q9Y587 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP4S1Q9Y587 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms