Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
APLFQ8IW19 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.62■□□□□ 0.09
APLFQ8IW19 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.62■□□□□ 0.09
APLFQ8IW19 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.62■□□□□ 0.09
APLFQ8IW19 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.62■□□□□ 0.09
APLFQ8IW19 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
APLFQ8IW19 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.62■□□□□ 0.09
APLFQ8IW19 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 AC236430.1-201ENST00000402231 743 ntBASIC15.62■□□□□ 0.09
APLFQ8IW19 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
APLFQ8IW19 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.62■□□□□ 0.09
APLFQ8IW19 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.62■□□□□ 0.09
APLFQ8IW19 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
APLFQ8IW19 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.62■□□□□ 0.09
APLFQ8IW19 RN7SL204P-201ENST00000582831 262 ntBASIC15.62■□□□□ 0.09
APLFQ8IW19 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.62■□□□□ 0.09
APLFQ8IW19 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.62■□□□□ 0.09
APLFQ8IW19 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.62■□□□□ 0.09
APLFQ8IW19 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.62■□□□□ 0.09
APLFQ8IW19 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.62■□□□□ 0.09
APLFQ8IW19 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.62■□□□□ 0.09
APLFQ8IW19 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.62■□□□□ 0.09
APLFQ8IW19 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
APLFQ8IW19 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
APLFQ8IW19 AL023775.1-201ENST00000454907 1746 ntBASIC15.62■□□□□ 0.09
APLFQ8IW19 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 TUBB8P12-201ENST00000308911 1335 ntBASIC15.62■□□□□ 0.09
APLFQ8IW19 TUBB7P-202ENST00000428444 1305 ntBASIC15.62■□□□□ 0.09
APLFQ8IW19 TUBB8P7-204ENST00000567960 1332 ntBASIC15.62■□□□□ 0.09
APLFQ8IW19 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
APLFQ8IW19 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.62■□□□□ 0.09
APLFQ8IW19 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
APLFQ8IW19 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.62■□□□□ 0.09
APLFQ8IW19 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.62■□□□□ 0.09
APLFQ8IW19 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
APLFQ8IW19 AC008677.1-201ENST00000519230 1561 ntBASIC15.62■□□□□ 0.09
APLFQ8IW19 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
APLFQ8IW19 FO538757.1-201ENST00000623083 1397 ntBASIC15.62■□□□□ 0.09
APLFQ8IW19 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
APLFQ8IW19 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.61■□□□□ 0.09
APLFQ8IW19 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
APLFQ8IW19 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.61■□□□□ 0.09
APLFQ8IW19 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
APLFQ8IW19 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 AC136621.1-201ENST00000624017 2304 ntBASIC15.61■□□□□ 0.09
APLFQ8IW19 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.61■□□□□ 0.09
APLFQ8IW19 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
APLFQ8IW19 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
APLFQ8IW19 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.61■□□□□ 0.09
APLFQ8IW19 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.61■□□□□ 0.09
APLFQ8IW19 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
APLFQ8IW19 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
APLFQ8IW19 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.61■□□□□ 0.09
APLFQ8IW19 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.61■□□□□ 0.09
APLFQ8IW19 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.61■□□□□ 0.09
APLFQ8IW19 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.61■□□□□ 0.09
APLFQ8IW19 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
APLFQ8IW19 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.61■□□□□ 0.09
APLFQ8IW19 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
APLFQ8IW19 AC008267.7-201ENST00000624570 1194 ntBASIC15.61■□□□□ 0.09
APLFQ8IW19 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.61■□□□□ 0.09
APLFQ8IW19 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.61■□□□□ 0.09
APLFQ8IW19 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.61■□□□□ 0.09
APLFQ8IW19 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
APLFQ8IW19 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms