Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMLP26374 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CHMLP26374 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CHMLP26374 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHMLP26374 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.8■□□□□ 0.6
CHMLP26374 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 AC000095.1-201ENST00000603208 874 ntBASIC18.8■□□□□ 0.6
CHMLP26374 AL391069.4-201ENST00000609583 481 ntBASIC18.8■□□□□ 0.6
CHMLP26374 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMLP26374 AC106028.4-201ENST00000614509 607 ntBASIC18.8■□□□□ 0.6
CHMLP26374 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CHMLP26374 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMLP26374 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 LINC02228-204ENST00000642115 2962 ntBASIC18.8■□□□□ 0.6
CHMLP26374 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMLP26374 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMLP26374 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMLP26374 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMLP26374 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMLP26374 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHMLP26374 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHMLP26374 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMLP26374 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMLP26374 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHMLP26374 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 BTBD7P1-201ENST00000447253 1453 ntBASIC18.79■□□□□ 0.6
CHMLP26374 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CHMLP26374 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHMLP26374 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHMLP26374 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMLP26374 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMLP26374 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMLP26374 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.79■□□□□ 0.6
CHMLP26374 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMLP26374 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMLP26374 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.79■□□□□ 0.6
CHMLP26374 GPALPP1-207ENST00000611650 899 ntBASIC18.79■□□□□ 0.6
CHMLP26374 AC004790.1-201ENST00000612686 536 ntBASIC18.79■□□□□ 0.6
CHMLP26374 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMLP26374 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHMLP26374 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMLP26374 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMLP26374 AP000845.1-201ENST00000581677 2131 ntBASIC18.79■□□□□ 0.6
CHMLP26374 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMLP26374 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMLP26374 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMLP26374 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMLP26374 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMLP26374 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMLP26374 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMLP26374 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMLP26374 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMLP26374 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHMLP26374 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMLP26374 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMLP26374 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMLP26374 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CHMLP26374 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMLP26374 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHMLP26374 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms