Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4E1Q9UPM8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4E1Q9UPM8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
AP4E1Q9UPM8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP4E1Q9UPM8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP4E1Q9UPM8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP4E1Q9UPM8 AC022144.1-201ENST00000602255 1580 ntBASIC16.26■□□□□ 0.19
AP4E1Q9UPM8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP4E1Q9UPM8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 BTBD7P1-201ENST00000447253 1453 ntBASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 AL512638.1-201ENST00000457493 794 ntBASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 AC015910.1-201ENST00000579400 975 ntBASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 AC008738.7-201ENST00000609744 511 ntBASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 AC084364.1-201ENST00000551967 1556 ntBASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.25■□□□□ 0.19
AP4E1Q9UPM8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 TOMM22P5-201ENST00000416399 439 ntBASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4E1Q9UPM8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 AC006486.2-201ENST00000624246 2199 ntBASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 TIMM17BP1-201ENST00000545713 516 ntBASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 AC092337.1-201ENST00000568699 1129 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms