Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 AL592071.1-201ENST00000611956 408 ntBASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 AL023973.1-201ENST00000624619 620 ntBASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 AC015818.8-201ENST00000587907 1519 ntBASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 AP001267.2-201ENST00000532619 2086 ntBASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 AL023775.1-201ENST00000454907 1746 ntBASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CHCHD1Q96BP2 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 AC246785.2-201ENST00000432512 513 ntBASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 RNF126P1-202ENST00000569893 925 ntBASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 AC005412.3-201ENST00000580309 715 ntBASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 AF228730.7-201ENST00000641842 219 ntBASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CHCHD1Q96BP2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CHCHD1Q96BP2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CHCHD1Q96BP2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.41□□□□□ -0.58
CHCHD1Q96BP2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms