Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
FAM78BQ5VT40 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
FAM78BQ5VT40 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.52□□□□□ -0.41
FAM78BQ5VT40 AC107918.4-201ENST00000641966 3141 ntBASIC12.52□□□□□ -0.41
FAM78BQ5VT40 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 AP002414.3-201ENST00000589352 1468 ntBASIC12.52□□□□□ -0.41
FAM78BQ5VT40 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
FAM78BQ5VT40 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms