Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 CRYGEP-201ENST00000412192 528 ntBASIC14.31□□□□□ -0.12
CXCR4P61073 IGLL3P-201ENST00000412472 434 ntBASIC14.31□□□□□ -0.12
CXCR4P61073 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.31□□□□□ -0.12
CXCR4P61073 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.31□□□□□ -0.12
CXCR4P61073 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 MBLAC2-202ENST00000514906 1936 ntBASIC14.31□□□□□ -0.12
CXCR4P61073 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCR4P61073 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CXCR4P61073 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CXCR4P61073 AC117489.1-201ENST00000625169 3217 ntBASIC14.3□□□□□ -0.12
CXCR4P61073 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCR4P61073 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCR4P61073 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.3□□□□□ -0.12
CXCR4P61073 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCR4P61073 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCR4P61073 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.3□□□□□ -0.12
CXCR4P61073 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.3□□□□□ -0.12
CXCR4P61073 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.3□□□□□ -0.12
CXCR4P61073 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.3□□□□□ -0.12
CXCR4P61073 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCR4P61073 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCR4P61073 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCR4P61073 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCR4P61073 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCR4P61073 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCR4P61073 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CXCR4P61073 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CXCR4P61073 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCR4P61073 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCR4P61073 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CXCR4P61073 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
CXCR4P61073 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCR4P61073 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CXCR4P61073 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCR4P61073 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CXCR4P61073 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CXCR4P61073 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms