Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CLDN8P56748 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN8P56748 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN8P56748 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN8P56748 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN8P56748 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CLDN8P56748 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN8P56748 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN8P56748 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLDN8P56748 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN8P56748 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN8P56748 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN8P56748 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN8P56748 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN8P56748 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN8P56748 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.9□□□□□ -0.02
CLDN8P56748 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN8P56748 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN8P56748 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN8P56748 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN8P56748 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
CLDN8P56748 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN8P56748 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 AL390755.1-201ENST00000623716 2027 ntBASIC14.9□□□□□ -0.02
CLDN8P56748 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN8P56748 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN8P56748 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CLDN8P56748 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CLDN8P56748 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CLDN8P56748 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 AJ011931.1-201ENST00000618749 2492 ntBASIC14.89□□□□□ -0.03
CLDN8P56748 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN8P56748 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLDN8P56748 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CLDN8P56748 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN8P56748 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN8P56748 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 SPDYE14P-201ENST00000442619 822 ntBASIC14.89□□□□□ -0.03
CLDN8P56748 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN8P56748 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN8P56748 AC026150.2-201ENST00000564693 1156 ntBASIC14.89□□□□□ -0.03
CLDN8P56748 MIR4469-201ENST00000583919 79 ntBASIC14.89□□□□□ -0.03
CLDN8P56748 AL671883.3-201ENST00000603274 991 ntBASIC14.89□□□□□ -0.03
CLDN8P56748 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN8P56748 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.89□□□□□ -0.03
CLDN8P56748 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN8P56748 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLDN8P56748 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN8P56748 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN8P56748 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN8P56748 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN8P56748 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms