Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 MEP1AP4-201ENST00000423244 1087 ntBASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 AL355385.1-201ENST00000606123 409 ntBASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 AL096865.1-201ENST00000606796 927 ntBASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HDGFL3Q9Y3E1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HDGFL3Q9Y3E1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
HDGFL3Q9Y3E1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HDGFL3Q9Y3E1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HDGFL3Q9Y3E1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
HDGFL3Q9Y3E1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
HDGFL3Q9Y3E1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HDGFL3Q9Y3E1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HDGFL3Q9Y3E1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.08□□□□□ -0.16
HDGFL3Q9Y3E1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms