Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.61□□□□□ -0.07
PER3P56645 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PER3P56645 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 GNAQP1-201ENST00000444815 1067 ntBASIC14.61□□□□□ -0.07
PER3P56645 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 AP005482.1-201ENST00000563722 1273 ntBASIC14.61□□□□□ -0.07
PER3P56645 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PER3P56645 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PER3P56645 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.61□□□□□ -0.07
PER3P56645 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 SNX33P1-201ENST00000592116 1762 ntBASIC14.6□□□□□ -0.07
PER3P56645 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PER3P56645 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PER3P56645 AC079776.1-201ENST00000401540 1152 ntBASIC14.6□□□□□ -0.07
PER3P56645 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.6□□□□□ -0.07
PER3P56645 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.6□□□□□ -0.07
PER3P56645 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.6□□□□□ -0.07
PER3P56645 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PER3P56645 AC133552.6-201ENST00000613406 534 ntBASIC14.6□□□□□ -0.07
PER3P56645 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PER3P56645 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PER3P56645 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PER3P56645 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.6□□□□□ -0.07
PER3P56645 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PER3P56645 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PER3P56645 SLC7A15P-201ENST00000424028 1363 ntBASIC14.6□□□□□ -0.07
PER3P56645 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PER3P56645 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.59□□□□□ -0.07
PER3P56645 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PER3P56645 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PER3P56645 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PER3P56645 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PER3P56645 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PER3P56645 AC067930.6-201ENST00000623257 4947 ntBASIC14.59□□□□□ -0.07
PER3P56645 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PER3P56645 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PER3P56645 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PER3P56645 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PER3P56645 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.59□□□□□ -0.07
PER3P56645 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PER3P56645 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PER3P56645 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms