Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
SLC9A3P48764 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC9A3P48764 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SLC9A3P48764 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC9A3P48764 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC9A3P48764 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC9A3P48764 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SLC9A3P48764 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC9A3P48764 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SLC9A3P48764 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SLC9A3P48764 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SLC9A3P48764 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC9A3P48764 GRK6P1-201ENST00000400595 1711 ntBASIC14.46□□□□□ -0.09
SLC9A3P48764 AC105250.1-201ENST00000509378 2057 ntBASIC14.46□□□□□ -0.09
SLC9A3P48764 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC9A3P48764 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC9A3P48764 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC9A3P48764 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC9A3P48764 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SLC9A3P48764 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SLC9A3P48764 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC9A3P48764 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SLC9A3P48764 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC9A3P48764 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC9A3P48764 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC9A3P48764 KRT8P23-201ENST00000560090 1207 ntBASIC14.46□□□□□ -0.09
SLC9A3P48764 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC9A3P48764 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC9A3P48764 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC9A3P48764 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC9A3P48764 BNIP3P1-202ENST00000550043 1585 ntBASIC14.46□□□□□ -0.09
SLC9A3P48764 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC9A3P48764 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.46□□□□□ -0.1
SLC9A3P48764 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC9A3P48764 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.46□□□□□ -0.1
SLC9A3P48764 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.46□□□□□ -0.1
SLC9A3P48764 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC9A3P48764 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SLC9A3P48764 AC139749.1-202ENST00000617529 3139 ntBASIC14.46□□□□□ -0.1
SLC9A3P48764 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC9A3P48764 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC9A3P48764 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC9A3P48764 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC9A3P48764 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC9A3P48764 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC9A3P48764 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SLC9A3P48764 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SLC9A3P48764 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC9A3P48764 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 HLA-H-201ENST00000383620 1096 ntBASIC14.45□□□□□ -0.1
SLC9A3P48764 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SLC9A3P48764 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 FAM58CP-201ENST00000435741 640 ntBASIC14.45□□□□□ -0.1
SLC9A3P48764 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC9A3P48764 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
SLC9A3P48764 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC9A3P48764 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC9A3P48764 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SLC9A3P48764 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC9A3P48764 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC9A3P48764 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms