Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RAB5BP61020 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
RAB5BP61020 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RAB5BP61020 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.3□□□□□ -0.44
RAB5BP61020 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5BP61020 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RAB5BP61020 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 AC011506.1-201ENST00000474329 610 ntBASIC12.3□□□□□ -0.44
RAB5BP61020 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5BP61020 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB5BP61020 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5BP61020 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5BP61020 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
RAB5BP61020 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5BP61020 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RAB5BP61020 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB5BP61020 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB5BP61020 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.29□□□□□ -0.44
RAB5BP61020 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB5BP61020 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB5BP61020 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB5BP61020 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB5BP61020 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RAB5BP61020 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RAB5BP61020 MFAP1P1-201ENST00000442257 1255 ntBASIC12.29□□□□□ -0.44
RAB5BP61020 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
RAB5BP61020 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
RAB5BP61020 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB5BP61020 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RAB5BP61020 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB5BP61020 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RAB5BP61020 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 AC073548.1-201ENST00000624088 1882 ntBASIC12.29□□□□□ -0.44
RAB5BP61020 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5BP61020 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms