Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN2P51788 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLCN2P51788 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCN2P51788 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN2P51788 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN2P51788 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLCN2P51788 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN2P51788 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCN2P51788 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLCN2P51788 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.29■□□□□ 0.04
CLCN2P51788 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCN2P51788 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLCN2P51788 AP001059.3-201ENST00000619053 235 ntBASIC15.29■□□□□ 0.04
CLCN2P51788 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCN2P51788 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CLCN2P51788 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCN2P51788 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLCN2P51788 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLCN2P51788 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLCN2P51788 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLCN2P51788 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN2P51788 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 AC008677.1-201ENST00000519230 1561 ntBASIC15.28■□□□□ 0.04
CLCN2P51788 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLCN2P51788 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCN2P51788 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN2P51788 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CLCN2P51788 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.28■□□□□ 0.04
CLCN2P51788 SPDYE7P-202ENST00000420373 878 ntBASIC15.28■□□□□ 0.04
CLCN2P51788 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN2P51788 AC142381.1-201ENST00000426099 345 ntBASIC15.28■□□□□ 0.04
CLCN2P51788 GPS2P2-201ENST00000430745 888 ntBASIC15.28■□□□□ 0.04
CLCN2P51788 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.28■□□□□ 0.04
CLCN2P51788 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN2P51788 AL512356.2-201ENST00000546955 174 ntBASIC15.28■□□□□ 0.04
CLCN2P51788 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.28■□□□□ 0.04
CLCN2P51788 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN2P51788 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCN2P51788 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCN2P51788 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN2P51788 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN2P51788 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 AC015656.1-201ENST00000624209 3578 ntBASIC15.28■□□□□ 0.04
CLCN2P51788 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN2P51788 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CLCN2P51788 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLCN2P51788 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLCN2P51788 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCN2P51788 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLCN2P51788 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN2P51788 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCN2P51788 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCN2P51788 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms