Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
LTAP01374 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.86□□□□□ -0.51
LTAP01374 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.86□□□□□ -0.51
LTAP01374 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 AF238378.1-201ENST00000526806 358 ntBASIC11.86□□□□□ -0.51
LTAP01374 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 MIR4751-201ENST00000578027 74 ntBASIC11.86□□□□□ -0.51
LTAP01374 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.86□□□□□ -0.51
LTAP01374 MIR3652-201ENST00000579335 131 ntBASIC11.86□□□□□ -0.51
LTAP01374 AC061975.2-201ENST00000581722 295 ntBASIC11.86□□□□□ -0.51
LTAP01374 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 AP002414.3-201ENST00000589352 1468 ntBASIC11.86□□□□□ -0.51
LTAP01374 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.86□□□□□ -0.51
LTAP01374 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.86□□□□□ -0.51
LTAP01374 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LTAP01374 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.86□□□□□ -0.51
LTAP01374 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.86□□□□□ -0.51
LTAP01374 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.86□□□□□ -0.51
LTAP01374 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
LTAP01374 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
LTAP01374 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.86□□□□□ -0.51
LTAP01374 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LTAP01374 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LTAP01374 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.85□□□□□ -0.51
LTAP01374 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.85□□□□□ -0.51
LTAP01374 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
LTAP01374 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.85□□□□□ -0.51
LTAP01374 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.85□□□□□ -0.51
LTAP01374 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.85□□□□□ -0.51
LTAP01374 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.85□□□□□ -0.51
LTAP01374 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.85□□□□□ -0.51
LTAP01374 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.85□□□□□ -0.51
LTAP01374 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.85□□□□□ -0.51
LTAP01374 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 BEND3P1-201ENST00000421591 1944 ntBASIC11.85□□□□□ -0.51
LTAP01374 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
LTAP01374 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
LTAP01374 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LTAP01374 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms