Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 Z92544.3-201ENST00000624747 417 ntBASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 AC006538.3-201ENST00000612495 578 ntBASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NHLRC1Q6VVB1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 HLA-V-204ENST00000476601 1289 ntBASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 AC090616.6-203ENST00000579186 1945 ntBASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NHLRC1Q6VVB1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms