Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.5□□□□□ -0.09
ABCD3P28288 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.5□□□□□ -0.09
ABCD3P28288 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.5□□□□□ -0.09
ABCD3P28288 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ABCD3P28288 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCD3P28288 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ABCD3P28288 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCD3P28288 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCD3P28288 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 AC132872.4-202ENST00000622924 2756 ntBASIC14.5□□□□□ -0.09
ABCD3P28288 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCD3P28288 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCD3P28288 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ABCD3P28288 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCD3P28288 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ABCD3P28288 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCD3P28288 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCD3P28288 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.49□□□□□ -0.09
ABCD3P28288 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.49□□□□□ -0.09
ABCD3P28288 TPRX2P-201ENST00000535362 881 ntBASIC14.49□□□□□ -0.09
ABCD3P28288 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
ABCD3P28288 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.49□□□□□ -0.09
ABCD3P28288 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
ABCD3P28288 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCD3P28288 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ABCD3P28288 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCD3P28288 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.49□□□□□ -0.09
ABCD3P28288 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCD3P28288 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCD3P28288 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCD3P28288 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCD3P28288 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ABCD3P28288 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCD3P28288 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCD3P28288 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.48□□□□□ -0.09
ABCD3P28288 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.48□□□□□ -0.09
ABCD3P28288 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCD3P28288 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCD3P28288 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCD3P28288 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.48□□□□□ -0.09
ABCD3P28288 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCD3P28288 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ABCD3P28288 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.48□□□□□ -0.09
ABCD3P28288 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.48□□□□□ -0.09
ABCD3P28288 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 AC093004.1-201ENST00000508850 424 ntBASIC14.48□□□□□ -0.09
ABCD3P28288 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms