Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.88□□□□□ -0.03
SNX4O95219 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SNX4O95219 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.88□□□□□ -0.03
SNX4O95219 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.88□□□□□ -0.03
SNX4O95219 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
SNX4O95219 AL355385.1-201ENST00000606123 409 ntBASIC14.88□□□□□ -0.03
SNX4O95219 AC026979.3-201ENST00000607315 403 ntBASIC14.88□□□□□ -0.03
SNX4O95219 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX4O95219 AC093512.1-201ENST00000617969 520 ntBASIC14.88□□□□□ -0.03
SNX4O95219 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SNX4O95219 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX4O95219 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SNX4O95219 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.88□□□□□ -0.03
SNX4O95219 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.88□□□□□ -0.03
SNX4O95219 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.88□□□□□ -0.03
SNX4O95219 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX4O95219 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SNX4O95219 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.88□□□□□ -0.03
SNX4O95219 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX4O95219 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX4O95219 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX4O95219 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX4O95219 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.87□□□□□ -0.03
SNX4O95219 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX4O95219 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX4O95219 AC069120.2-201ENST00000524091 540 ntBASIC14.87□□□□□ -0.03
SNX4O95219 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.87□□□□□ -0.03
SNX4O95219 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX4O95219 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.87□□□□□ -0.03
SNX4O95219 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX4O95219 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
SNX4O95219 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX4O95219 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX4O95219 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.87□□□□□ -0.03
SNX4O95219 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNX4O95219 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.87□□□□□ -0.03
SNX4O95219 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.87□□□□□ -0.03
SNX4O95219 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SNX4O95219 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SNX4O95219 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.86□□□□□ -0.03
SNX4O95219 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SNX4O95219 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 PRAL-201ENST00000624952 3286 ntBASIC14.86□□□□□ -0.03
SNX4O95219 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SNX4O95219 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.86□□□□□ -0.03
SNX4O95219 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNX4O95219 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SNX4O95219 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms