Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 KRT8P39-201ENST00000396270 1433 ntBASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 AC092933.1-201ENST00000393644 945 ntBASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 AC092364.2-201ENST00000596710 2692 ntBASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE5Q9HCH3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 BOLA2P3-201ENST00000404566 256 ntBASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 AC004945.1-201ENST00000416738 983 ntBASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 AC093726.1-201ENST00000608064 963 ntBASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 MIR6869-201ENST00000619434 62 ntBASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE5Q9HCH3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CPNE5Q9HCH3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE5Q9HCH3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE5Q9HCH3 SNX33P1-201ENST00000592116 1762 ntBASIC15.26■□□□□ 0.03
CPNE5Q9HCH3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE5Q9HCH3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CPNE5Q9HCH3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE5Q9HCH3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms