Protein–RNA interactions for Protein: Q9BTV4

TMEM43, Transmembrane protein 43, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM43Q9BTV4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 AC090616.6-203ENST00000579186 1945 ntBASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 AC106881.1-201ENST00000605849 3329 ntBASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 AL359258.3-201ENST00000622910 2331 ntBASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM43Q9BTV4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 GPS2P2-201ENST00000430745 888 ntBASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 AC105021.1-202ENST00000570572 669 ntBASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 AC010327.4-202ENST00000591484 748 ntBASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 AC009093.7-201ENST00000623853 1223 ntBASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 CICP4-201ENST00000447359 2812 ntBASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM43Q9BTV4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 AL035456.1-201ENST00000456064 1369 ntBASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 AC104581.4-201ENST00000623126 3052 ntBASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM43Q9BTV4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms