Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP53Q96M91 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CFAP53Q96M91 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP53Q96M91 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.96■□□□□ 0.95
CFAP53Q96M91 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.96■□□□□ 0.95
CFAP53Q96M91 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP53Q96M91 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.96■□□□□ 0.95
CFAP53Q96M91 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CFAP53Q96M91 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CFAP53Q96M91 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC20.96■□□□□ 0.95
CFAP53Q96M91 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFAP53Q96M91 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 AL442647.2-201ENST00000429864 857 ntBASIC20.95■□□□□ 0.94
CFAP53Q96M91 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 AC012645.4-201ENST00000610691 1061 ntBASIC20.95■□□□□ 0.94
CFAP53Q96M91 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CFAP53Q96M91 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.95■□□□□ 0.94
CFAP53Q96M91 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CFAP53Q96M91 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP53Q96M91 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP53Q96M91 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CFAP53Q96M91 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms