Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL3Q8N8U3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL3Q8N8U3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.12■□□□□ 0.17
RTL3Q8N8U3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTL3Q8N8U3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RTL3Q8N8U3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 AL121723.1-201ENST00000445194 1519 ntBASIC16.11■□□□□ 0.17
RTL3Q8N8U3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 SPDYE19P-201ENST00000338590 713 ntBASIC16.11■□□□□ 0.17
RTL3Q8N8U3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 KRT18P43-201ENST00000469825 1281 ntBASIC16.11■□□□□ 0.17
RTL3Q8N8U3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 MIR4745-201ENST00000577608 62 ntBASIC16.11■□□□□ 0.17
RTL3Q8N8U3 LINC02560-201ENST00000596379 459 ntBASIC16.11■□□□□ 0.17
RTL3Q8N8U3 AL391069.4-201ENST00000609583 481 ntBASIC16.11■□□□□ 0.17
RTL3Q8N8U3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 AC008761.3-201ENST00000624803 892 ntBASIC16.11■□□□□ 0.17
RTL3Q8N8U3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RTL3Q8N8U3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.1■□□□□ 0.17
RTL3Q8N8U3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 AC236430.1-201ENST00000402231 743 ntBASIC16.1■□□□□ 0.17
RTL3Q8N8U3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 AC002472.2-201ENST00000442739 958 ntBASIC16.1■□□□□ 0.17
RTL3Q8N8U3 GNAQP1-201ENST00000444815 1067 ntBASIC16.1■□□□□ 0.17
RTL3Q8N8U3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 TPRX2P-201ENST00000535362 881 ntBASIC16.1■□□□□ 0.17
RTL3Q8N8U3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.1■□□□□ 0.17
RTL3Q8N8U3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms