Protein–RNA interactions for Protein: Q8N815

CNTD1, Cyclin N-terminal domain-containing protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1Q8N815 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 AC241585.1-201ENST00000433527 519 ntBASIC16.03■□□□□ 0.16
CNTD1Q8N815 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 ZNF890P-202ENST00000530367 1156 ntBASIC16.03■□□□□ 0.16
CNTD1Q8N815 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 AC009407.1-201ENST00000568958 598 ntBASIC16.03■□□□□ 0.16
CNTD1Q8N815 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 LINC01115-203ENST00000606068 577 ntBASIC16.03■□□□□ 0.16
CNTD1Q8N815 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 AF228730.6-201ENST00000641497 218 ntBASIC16.03■□□□□ 0.16
CNTD1Q8N815 AC084121.3-201ENST00000641716 218 ntBASIC16.03■□□□□ 0.16
CNTD1Q8N815 AL109936.8-201ENST00000641772 604 ntBASIC16.03■□□□□ 0.16
CNTD1Q8N815 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTD1Q8N815 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTD1Q8N815 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.02■□□□□ 0.16
CNTD1Q8N815 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 AC009477.1-201ENST00000452936 217 ntBASIC16.02■□□□□ 0.16
CNTD1Q8N815 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.02■□□□□ 0.16
CNTD1Q8N815 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTD1Q8N815 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.02■□□□□ 0.16
CNTD1Q8N815 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.02■□□□□ 0.15
CNTD1Q8N815 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.02■□□□□ 0.15
CNTD1Q8N815 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
CNTD1Q8N815 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTD1Q8N815 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.01■□□□□ 0.15
CNTD1Q8N815 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CNTD1Q8N815 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTD1Q8N815 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms