Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB43Q86YS6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 AC098614.1-201ENST00000368528 745 ntBASIC15.12■□□□□ 0.01
RAB43Q86YS6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 COX5BP8-201ENST00000416911 349 ntBASIC15.12■□□□□ 0.01
RAB43Q86YS6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 DOC2GP-202ENST00000514950 1163 ntBASIC15.12■□□□□ 0.01
RAB43Q86YS6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 AC044860.1-202ENST00000559481 777 ntBASIC15.12■□□□□ 0.01
RAB43Q86YS6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB43Q86YS6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RAB43Q86YS6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB43Q86YS6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB43Q86YS6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms