Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF11Q9Y3C5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF11Q9Y3C5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF11Q9Y3C5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF11Q9Y3C5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF11Q9Y3C5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
RNF11Q9Y3C5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 U85056.1-201ENST00000616429 682 ntBASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.72■■□□□ 1.23
RNF11Q9Y3C5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF11Q9Y3C5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.71■■□□□ 1.23
RNF11Q9Y3C5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF11Q9Y3C5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF11Q9Y3C5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.71■■□□□ 1.23
RNF11Q9Y3C5 AC018755.3-202ENST00000596210 929 ntBASIC22.71■■□□□ 1.23
RNF11Q9Y3C5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF11Q9Y3C5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF11Q9Y3C5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.7■■□□□ 1.23
RNF11Q9Y3C5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.7■■□□□ 1.22
RNF11Q9Y3C5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF11Q9Y3C5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
RNF11Q9Y3C5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF11Q9Y3C5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.7■■□□□ 1.22
RNF11Q9Y3C5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF11Q9Y3C5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.69■■□□□ 1.22
RNF11Q9Y3C5 RPS2P7-201ENST00000447334 885 ntBASIC22.69■■□□□ 1.22
RNF11Q9Y3C5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF11Q9Y3C5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF11Q9Y3C5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF11Q9Y3C5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF11Q9Y3C5 DUX4L9-201ENST00000449051 1259 ntBASIC22.68■■□□□ 1.22
RNF11Q9Y3C5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF11Q9Y3C5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF11Q9Y3C5 AC068473.5-201ENST00000616428 2072 ntBASIC22.68■■□□□ 1.22
RNF11Q9Y3C5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF11Q9Y3C5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF11Q9Y3C5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF11Q9Y3C5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF11Q9Y3C5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF11Q9Y3C5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF11Q9Y3C5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
RNF11Q9Y3C5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF11Q9Y3C5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF11Q9Y3C5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 LINC00543-201ENST00000567234 1845 ntBASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF11Q9Y3C5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF11Q9Y3C5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF11Q9Y3C5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RNF11Q9Y3C5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF11Q9Y3C5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.65■■□□□ 1.22
RNF11Q9Y3C5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RNF11Q9Y3C5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF11Q9Y3C5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF11Q9Y3C5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF11Q9Y3C5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF11Q9Y3C5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RNF11Q9Y3C5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RNF11Q9Y3C5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.64■■□□□ 1.21
RNF11Q9Y3C5 MIR6765-201ENST00000614092 87 ntBASIC22.64■■□□□ 1.21
RNF11Q9Y3C5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.64■■□□□ 1.21
RNF11Q9Y3C5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RNF11Q9Y3C5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF11Q9Y3C5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF11Q9Y3C5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
RNF11Q9Y3C5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF11Q9Y3C5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF11Q9Y3C5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF11Q9Y3C5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RNF11Q9Y3C5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF11Q9Y3C5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF11Q9Y3C5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF11Q9Y3C5 KRT18P60-201ENST00000312876 1297 ntBASIC22.62■■□□□ 1.21
RNF11Q9Y3C5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF11Q9Y3C5 AC087393.1-201ENST00000582896 145 ntBASIC22.62■■□□□ 1.21
RNF11Q9Y3C5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF11Q9Y3C5 AC129492.7-201ENST00000622992 756 ntBASIC22.62■■□□□ 1.21
RNF11Q9Y3C5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF11Q9Y3C5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF11Q9Y3C5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF11Q9Y3C5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF11Q9Y3C5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms