Protein–RNA interactions for Protein: Q9UPA5

BSN, Protein bassoon, humanhuman

Predictions only

Length 3,926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSNQ9UPA5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BSNQ9UPA5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BSNQ9UPA5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.42■■□□□ 1.02
BSNQ9UPA5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.41■■□□□ 1.02
BSNQ9UPA5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.41■■□□□ 1.02
BSNQ9UPA5 AC092437.1-201ENST00000624794 1048 ntBASIC21.41■■□□□ 1.02
BSNQ9UPA5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
BSNQ9UPA5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BSNQ9UPA5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
BSNQ9UPA5 SYT6-210ENST00000641643 1587 ntBASIC21.41■■□□□ 1.02
BSNQ9UPA5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BSNQ9UPA5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BSNQ9UPA5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BSNQ9UPA5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BSNQ9UPA5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.4■■□□□ 1.02
BSNQ9UPA5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BSNQ9UPA5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BSNQ9UPA5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BSNQ9UPA5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BSNQ9UPA5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BSNQ9UPA5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BSNQ9UPA5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
BSNQ9UPA5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.39■■□□□ 1.02
BSNQ9UPA5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.39■■□□□ 1.02
BSNQ9UPA5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.39■■□□□ 1.02
BSNQ9UPA5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.39■■□□□ 1.01
BSNQ9UPA5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.39■■□□□ 1.01
BSNQ9UPA5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.39■■□□□ 1.01
BSNQ9UPA5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BSNQ9UPA5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
BSNQ9UPA5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
BSNQ9UPA5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.39■■□□□ 1.01
BSNQ9UPA5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BSNQ9UPA5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.38■■□□□ 1.01
BSNQ9UPA5 IKBKGP1-201ENST00000612193 1073 ntBASIC21.38■■□□□ 1.01
BSNQ9UPA5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.38■■□□□ 1.01
BSNQ9UPA5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BSNQ9UPA5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BSNQ9UPA5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BSNQ9UPA5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BSNQ9UPA5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.38■■□□□ 1.01
BSNQ9UPA5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.37■■□□□ 1.01
BSNQ9UPA5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BSNQ9UPA5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BSNQ9UPA5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
BSNQ9UPA5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BSNQ9UPA5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BSNQ9UPA5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.36■■□□□ 1.01
BSNQ9UPA5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.36■■□□□ 1.01
BSNQ9UPA5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
BSNQ9UPA5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.36■■□□□ 1.01
BSNQ9UPA5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.36■■□□□ 1.01
BSNQ9UPA5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.36■■□□□ 1.01
BSNQ9UPA5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BSNQ9UPA5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.36■■□□□ 1.01
BSNQ9UPA5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.36■■□□□ 1.01
BSNQ9UPA5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BSNQ9UPA5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.36■■□□□ 1.01
BSNQ9UPA5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
BSNQ9UPA5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
BSNQ9UPA5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
BSNQ9UPA5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
BSNQ9UPA5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
BSNQ9UPA5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
BSNQ9UPA5 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.34■■□□□ 1.01
BSNQ9UPA5 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.34■■□□□ 1.01
BSNQ9UPA5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.34■■□□□ 1.01
BSNQ9UPA5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.34■■□□□ 1.01
BSNQ9UPA5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
BSNQ9UPA5 SRD5A1P1-201ENST00000442297 786 ntBASIC21.34■■□□□ 1.01
BSNQ9UPA5 AC022517.1-201ENST00000592429 346 ntBASIC21.34■■□□□ 1.01
BSNQ9UPA5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
BSNQ9UPA5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.33■■□□□ 1.01
BSNQ9UPA5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
BSNQ9UPA5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.33■■□□□ 1
BSNQ9UPA5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.33■■□□□ 1
BSNQ9UPA5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.33■■□□□ 1
BSNQ9UPA5 AP004609.3-201ENST00000610705 1884 ntBASIC21.33■■□□□ 1
BSNQ9UPA5 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
BSNQ9UPA5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.33■■□□□ 1
BSNQ9UPA5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
BSNQ9UPA5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.32■■□□□ 1
BSNQ9UPA5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.32■■□□□ 1
BSNQ9UPA5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BSNQ9UPA5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.32■■□□□ 1
BSNQ9UPA5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BSNQ9UPA5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.32■■□□□ 1
BSNQ9UPA5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.32■■□□□ 1
BSNQ9UPA5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.32■■□□□ 1
BSNQ9UPA5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
BSNQ9UPA5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.32■■□□□ 1
BSNQ9UPA5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BSNQ9UPA5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BSNQ9UPA5 MIR4767-201ENST00000582827 78 ntBASIC21.31■■□□□ 1
BSNQ9UPA5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BSNQ9UPA5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.31■■□□□ 1
BSNQ9UPA5 AC034268.1-201ENST00000441047 882 ntBASIC21.31■■□□□ 1
BSNQ9UPA5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BSNQ9UPA5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
BSNQ9UPA5 AC027682.1-201ENST00000562846 899 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms