Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DUX4Q9UBX2 AC026202.3-201ENST00000600805 1127 ntBASIC20.27■□□□□ 0.84
DUX4Q9UBX2 U85056.1-201ENST00000616429 682 ntBASIC20.27■□□□□ 0.84
DUX4Q9UBX2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
DUX4Q9UBX2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
DUX4Q9UBX2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DUX4Q9UBX2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
DUX4Q9UBX2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.26■□□□□ 0.83
DUX4Q9UBX2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DUX4Q9UBX2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DUX4Q9UBX2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DUX4Q9UBX2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DUX4Q9UBX2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
DUX4Q9UBX2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DUX4Q9UBX2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
DUX4Q9UBX2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
DUX4Q9UBX2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DUX4Q9UBX2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DUX4Q9UBX2 AC068473.5-201ENST00000616428 2072 ntBASIC20.24■□□□□ 0.83
DUX4Q9UBX2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DUX4Q9UBX2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DUX4Q9UBX2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DUX4Q9UBX2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
DUX4Q9UBX2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DUX4Q9UBX2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DUX4Q9UBX2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DUX4Q9UBX2 RAP2CP1-202ENST00000605179 643 ntBASIC20.23■□□□□ 0.83
DUX4Q9UBX2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
DUX4Q9UBX2 AC133552.2-201ENST00000619106 1032 ntBASIC20.23■□□□□ 0.83
DUX4Q9UBX2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DUX4Q9UBX2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DUX4Q9UBX2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DUX4Q9UBX2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DUX4Q9UBX2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DUX4Q9UBX2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DUX4Q9UBX2 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.22■□□□□ 0.83
DUX4Q9UBX2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.22■□□□□ 0.83
DUX4Q9UBX2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DUX4Q9UBX2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DUX4Q9UBX2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DUX4Q9UBX2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DUX4Q9UBX2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.21■□□□□ 0.83
DUX4Q9UBX2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.21■□□□□ 0.83
DUX4Q9UBX2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DUX4Q9UBX2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DUX4Q9UBX2 AL592293.1-201ENST00000502889 1188 ntBASIC20.21■□□□□ 0.83
DUX4Q9UBX2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DUX4Q9UBX2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DUX4Q9UBX2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
DUX4Q9UBX2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
DUX4Q9UBX2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DUX4Q9UBX2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DUX4Q9UBX2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DUX4Q9UBX2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DUX4Q9UBX2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DUX4Q9UBX2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
DUX4Q9UBX2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DUX4Q9UBX2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DUX4Q9UBX2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
DUX4Q9UBX2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
DUX4Q9UBX2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 AC142381.3-201ENST00000568208 1670 ntBASIC20.19■□□□□ 0.82
DUX4Q9UBX2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DUX4Q9UBX2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 NTF6A-201ENST00000591175 560 ntBASIC20.18■□□□□ 0.82
DUX4Q9UBX2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DUX4Q9UBX2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DUX4Q9UBX2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DUX4Q9UBX2 KRT18P60-201ENST00000312876 1297 ntBASIC20.17■□□□□ 0.82
DUX4Q9UBX2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DUX4Q9UBX2 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms