Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCSER1Q9C0I3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCSER1Q9C0I3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 AC074183.2-201ENST00000623112 922 ntBASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.25■■□□□ 1.79
CCSER1Q9C0I3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCSER1Q9C0I3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.24■■□□□ 1.79
CCSER1Q9C0I3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCSER1Q9C0I3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCSER1Q9C0I3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCSER1Q9C0I3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.24■■□□□ 1.79
CCSER1Q9C0I3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
CCSER1Q9C0I3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.23■■□□□ 1.79
CCSER1Q9C0I3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.23■■□□□ 1.79
CCSER1Q9C0I3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCSER1Q9C0I3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.23■■□□□ 1.79
CCSER1Q9C0I3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.22■■□□□ 1.79
CCSER1Q9C0I3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCSER1Q9C0I3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCSER1Q9C0I3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.22■■□□□ 1.79
CCSER1Q9C0I3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCSER1Q9C0I3 AC022616.5-201ENST00000518796 181 ntBASIC26.22■■□□□ 1.79
CCSER1Q9C0I3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CCSER1Q9C0I3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.22■■□□□ 1.79
CCSER1Q9C0I3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCSER1Q9C0I3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCSER1Q9C0I3 PVT1_1.1-201ENST00000615125 194 ntBASIC26.21■■□□□ 1.79
CCSER1Q9C0I3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCSER1Q9C0I3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCSER1Q9C0I3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCSER1Q9C0I3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCSER1Q9C0I3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCSER1Q9C0I3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.2■■□□□ 1.79
CCSER1Q9C0I3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCSER1Q9C0I3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCSER1Q9C0I3 BHLHE23-202ENST00000612929 1109 ntBASIC26.2■■□□□ 1.78
CCSER1Q9C0I3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCSER1Q9C0I3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCSER1Q9C0I3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.19■■□□□ 1.78
CCSER1Q9C0I3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCSER1Q9C0I3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCSER1Q9C0I3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.19■■□□□ 1.78
CCSER1Q9C0I3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CCSER1Q9C0I3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCSER1Q9C0I3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.18■■□□□ 1.78
CCSER1Q9C0I3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CCSER1Q9C0I3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.18■■□□□ 1.78
CCSER1Q9C0I3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CCSER1Q9C0I3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCSER1Q9C0I3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.17■■□□□ 1.78
CCSER1Q9C0I3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCSER1Q9C0I3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCSER1Q9C0I3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCSER1Q9C0I3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.16■■□□□ 1.78
CCSER1Q9C0I3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.16■■□□□ 1.78
CCSER1Q9C0I3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.16■■□□□ 1.78
CCSER1Q9C0I3 AL033527.3-201ENST00000566366 1196 ntBASIC26.16■■□□□ 1.78
CCSER1Q9C0I3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.16■■□□□ 1.78
CCSER1Q9C0I3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.16■■□□□ 1.78
CCSER1Q9C0I3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCSER1Q9C0I3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 AC010980.1-201ENST00000587192 1142 ntBASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 AC011551.1-201ENST00000614101 683 ntBASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCSER1Q9C0I3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCSER1Q9C0I3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCSER1Q9C0I3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.14■■□□□ 1.78
CCSER1Q9C0I3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCSER1Q9C0I3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.14■■□□□ 1.78
CCSER1Q9C0I3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCSER1Q9C0I3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCSER1Q9C0I3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.13■■□□□ 1.77
CCSER1Q9C0I3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCSER1Q9C0I3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCSER1Q9C0I3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CCSER1Q9C0I3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCSER1Q9C0I3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.12■■□□□ 1.77
CCSER1Q9C0I3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCSER1Q9C0I3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCSER1Q9C0I3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCSER1Q9C0I3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCSER1Q9C0I3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms