Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
DHX40Q8IX18 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26■■□□□ 1.75
DHX40Q8IX18 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
DHX40Q8IX18 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26■■□□□ 1.75
DHX40Q8IX18 HSD17B1P1-201ENST00000590052 955 ntBASIC26■■□□□ 1.75
DHX40Q8IX18 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26■■□□□ 1.75
DHX40Q8IX18 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26■■□□□ 1.75
DHX40Q8IX18 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DHX40Q8IX18 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.99■■□□□ 1.75
DHX40Q8IX18 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.99■■□□□ 1.75
DHX40Q8IX18 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
DHX40Q8IX18 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
DHX40Q8IX18 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
DHX40Q8IX18 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DHX40Q8IX18 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
DHX40Q8IX18 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
DHX40Q8IX18 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
DHX40Q8IX18 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
DHX40Q8IX18 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DHX40Q8IX18 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
DHX40Q8IX18 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DHX40Q8IX18 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.98■■□□□ 1.75
DHX40Q8IX18 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
DHX40Q8IX18 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DHX40Q8IX18 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DHX40Q8IX18 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
DHX40Q8IX18 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DHX40Q8IX18 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DHX40Q8IX18 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DHX40Q8IX18 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
DHX40Q8IX18 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DHX40Q8IX18 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
DHX40Q8IX18 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DHX40Q8IX18 AC079834.2-201ENST00000609776 1949 ntBASIC25.96■■□□□ 1.75
DHX40Q8IX18 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DHX40Q8IX18 AC092296.2-201ENST00000589470 999 ntBASIC25.96■■□□□ 1.75
DHX40Q8IX18 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.95■■□□□ 1.74
DHX40Q8IX18 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DHX40Q8IX18 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
DHX40Q8IX18 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.95■■□□□ 1.74
DHX40Q8IX18 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.95■■□□□ 1.74
DHX40Q8IX18 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DHX40Q8IX18 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DHX40Q8IX18 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DHX40Q8IX18 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DHX40Q8IX18 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DHX40Q8IX18 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
DHX40Q8IX18 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
DHX40Q8IX18 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.94■■□□□ 1.74
DHX40Q8IX18 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
DHX40Q8IX18 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.94■■□□□ 1.74
DHX40Q8IX18 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DHX40Q8IX18 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DHX40Q8IX18 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DHX40Q8IX18 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DHX40Q8IX18 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DHX40Q8IX18 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.93■■□□□ 1.74
DHX40Q8IX18 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
DHX40Q8IX18 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.93■■□□□ 1.74
DHX40Q8IX18 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DHX40Q8IX18 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.93■■□□□ 1.74
DHX40Q8IX18 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.92■■□□□ 1.74
DHX40Q8IX18 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DHX40Q8IX18 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.92■■□□□ 1.74
DHX40Q8IX18 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
DHX40Q8IX18 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
DHX40Q8IX18 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.91■■□□□ 1.74
DHX40Q8IX18 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
DHX40Q8IX18 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.91■■□□□ 1.74
DHX40Q8IX18 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.9■■□□□ 1.74
DHX40Q8IX18 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DHX40Q8IX18 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.9■■□□□ 1.74
DHX40Q8IX18 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
DHX40Q8IX18 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.9■■□□□ 1.74
DHX40Q8IX18 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.9■■□□□ 1.74
DHX40Q8IX18 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
DHX40Q8IX18 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.9■■□□□ 1.74
DHX40Q8IX18 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.89■■□□□ 1.74
DHX40Q8IX18 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.89■■□□□ 1.73
DHX40Q8IX18 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
DHX40Q8IX18 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
DHX40Q8IX18 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DHX40Q8IX18 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DHX40Q8IX18 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DHX40Q8IX18 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.88■■□□□ 1.73
DHX40Q8IX18 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DHX40Q8IX18 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms