Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CPNE8Q86YQ8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE8Q86YQ8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 KRT18P60-201ENST00000312876 1297 ntBASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE8Q86YQ8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CPNE8Q86YQ8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CPNE8Q86YQ8 AC129492.7-201ENST00000622992 756 ntBASIC24.49■■□□□ 1.51
CPNE8Q86YQ8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.49■■□□□ 1.51
CPNE8Q86YQ8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CPNE8Q86YQ8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CPNE8Q86YQ8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CPNE8Q86YQ8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE8Q86YQ8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE8Q86YQ8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE8Q86YQ8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.48■■□□□ 1.51
CPNE8Q86YQ8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.48■■□□□ 1.51
CPNE8Q86YQ8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.48■■□□□ 1.51
CPNE8Q86YQ8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE8Q86YQ8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CPNE8Q86YQ8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
CPNE8Q86YQ8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CPNE8Q86YQ8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.47■■□□□ 1.51
CPNE8Q86YQ8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.47■■□□□ 1.51
CPNE8Q86YQ8 AC018755.3-202ENST00000596210 929 ntBASIC24.47■■□□□ 1.51
CPNE8Q86YQ8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CPNE8Q86YQ8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
CPNE8Q86YQ8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CPNE8Q86YQ8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CPNE8Q86YQ8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.46■■□□□ 1.51
CPNE8Q86YQ8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CPNE8Q86YQ8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.46■■□□□ 1.51
CPNE8Q86YQ8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CPNE8Q86YQ8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CPNE8Q86YQ8 AC141586.4-201ENST00000624558 1573 ntBASIC24.46■■□□□ 1.51
CPNE8Q86YQ8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CPNE8Q86YQ8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CPNE8Q86YQ8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.45■■□□□ 1.5
CPNE8Q86YQ8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CPNE8Q86YQ8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CPNE8Q86YQ8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CPNE8Q86YQ8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CPNE8Q86YQ8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CPNE8Q86YQ8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CPNE8Q86YQ8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CPNE8Q86YQ8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CPNE8Q86YQ8 AC087393.1-201ENST00000582896 145 ntBASIC24.44■■□□□ 1.5
CPNE8Q86YQ8 MIR6765-201ENST00000614092 87 ntBASIC24.44■■□□□ 1.5
CPNE8Q86YQ8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CPNE8Q86YQ8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.44■■□□□ 1.5
CPNE8Q86YQ8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.43■■□□□ 1.5
CPNE8Q86YQ8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPNE8Q86YQ8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.43■■□□□ 1.5
CPNE8Q86YQ8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPNE8Q86YQ8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPNE8Q86YQ8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPNE8Q86YQ8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CPNE8Q86YQ8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
CPNE8Q86YQ8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CPNE8Q86YQ8 KRT18P10-201ENST00000388836 1287 ntBASIC24.42■■□□□ 1.5
CPNE8Q86YQ8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.42■■□□□ 1.5
CPNE8Q86YQ8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CPNE8Q86YQ8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
CPNE8Q86YQ8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.42■■□□□ 1.5
CPNE8Q86YQ8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CPNE8Q86YQ8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
CPNE8Q86YQ8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CPNE8Q86YQ8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CPNE8Q86YQ8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.41■■□□□ 1.5
CPNE8Q86YQ8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CPNE8Q86YQ8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.41■■□□□ 1.5
CPNE8Q86YQ8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.4■■□□□ 1.5
CPNE8Q86YQ8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CPNE8Q86YQ8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CPNE8Q86YQ8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.4■■□□□ 1.5
CPNE8Q86YQ8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms