Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
VPS36Q86VN1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.03■■□□□ 1.6
VPS36Q86VN1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
VPS36Q86VN1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.02■■□□□ 1.6
VPS36Q86VN1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
VPS36Q86VN1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
VPS36Q86VN1 AC133552.2-201ENST00000619106 1032 ntBASIC25.02■■□□□ 1.6
VPS36Q86VN1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.02■■□□□ 1.6
VPS36Q86VN1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC25.02■■□□□ 1.6
VPS36Q86VN1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
VPS36Q86VN1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
VPS36Q86VN1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
VPS36Q86VN1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
VPS36Q86VN1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
VPS36Q86VN1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
VPS36Q86VN1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
VPS36Q86VN1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
VPS36Q86VN1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
VPS36Q86VN1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
VPS36Q86VN1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
VPS36Q86VN1 AC009831.1-201ENST00000580420 1582 ntBASIC25.01■■□□□ 1.59
VPS36Q86VN1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25■■□□□ 1.59
VPS36Q86VN1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
VPS36Q86VN1 HLA-L-211ENST00000482052 1765 ntBASIC25■■□□□ 1.59
VPS36Q86VN1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS36Q86VN1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS36Q86VN1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.99■■□□□ 1.59
VPS36Q86VN1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
VPS36Q86VN1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS36Q86VN1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
VPS36Q86VN1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.98■■□□□ 1.59
VPS36Q86VN1 ABHD17AP5-201ENST00000580133 923 ntBASIC24.98■■□□□ 1.59
VPS36Q86VN1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
VPS36Q86VN1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS36Q86VN1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS36Q86VN1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
VPS36Q86VN1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS36Q86VN1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS36Q86VN1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
VPS36Q86VN1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS36Q86VN1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
VPS36Q86VN1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS36Q86VN1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS36Q86VN1 AC004812.2-201ENST00000611079 2094 ntBASIC24.97■■□□□ 1.59
VPS36Q86VN1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VPS36Q86VN1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS36Q86VN1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS36Q86VN1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS36Q86VN1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS36Q86VN1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS36Q86VN1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
VPS36Q86VN1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS36Q86VN1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
VPS36Q86VN1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
VPS36Q86VN1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.95■■□□□ 1.59
VPS36Q86VN1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS36Q86VN1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.95■■□□□ 1.58
VPS36Q86VN1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS36Q86VN1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS36Q86VN1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS36Q86VN1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS36Q86VN1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS36Q86VN1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS36Q86VN1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
VPS36Q86VN1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS36Q86VN1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.94■■□□□ 1.58
VPS36Q86VN1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS36Q86VN1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS36Q86VN1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS36Q86VN1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS36Q86VN1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
VPS36Q86VN1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
VPS36Q86VN1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.92■■□□□ 1.58
VPS36Q86VN1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
VPS36Q86VN1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
VPS36Q86VN1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS36Q86VN1 AC018755.3-202ENST00000596210 929 ntBASIC24.92■■□□□ 1.58
VPS36Q86VN1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.92■■□□□ 1.58
VPS36Q86VN1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.92■■□□□ 1.58
VPS36Q86VN1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.92■■□□□ 1.58
VPS36Q86VN1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS36Q86VN1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
VPS36Q86VN1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.92■■□□□ 1.58
VPS36Q86VN1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS36Q86VN1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
VPS36Q86VN1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS36Q86VN1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS36Q86VN1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS36Q86VN1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
VPS36Q86VN1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.91■■□□□ 1.58
VPS36Q86VN1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.91■■□□□ 1.58
VPS36Q86VN1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS36Q86VN1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS36Q86VN1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.9■■□□□ 1.58
VPS36Q86VN1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
VPS36Q86VN1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS36Q86VN1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS36Q86VN1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS36Q86VN1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
VPS36Q86VN1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms