Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
DENND4AQ7Z401 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.43■■□□□ 1.5
DENND4AQ7Z401 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
DENND4AQ7Z401 EDA-201ENST00000338901 1233 ntBASIC24.43■■□□□ 1.5
DENND4AQ7Z401 AC105265.2-201ENST00000467189 838 ntBASIC24.43■■□□□ 1.5
DENND4AQ7Z401 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.43■■□□□ 1.5
DENND4AQ7Z401 MIR6722-201ENST00000617286 78 ntBASIC24.43■■□□□ 1.5
DENND4AQ7Z401 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DENND4AQ7Z401 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DENND4AQ7Z401 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DENND4AQ7Z401 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DENND4AQ7Z401 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.42■■□□□ 1.5
DENND4AQ7Z401 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
DENND4AQ7Z401 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
DENND4AQ7Z401 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
DENND4AQ7Z401 AP001330.3-201ENST00000520123 633 ntBASIC24.41■■□□□ 1.5
DENND4AQ7Z401 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.41■■□□□ 1.5
DENND4AQ7Z401 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
DENND4AQ7Z401 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
DENND4AQ7Z401 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DENND4AQ7Z401 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.4■■□□□ 1.5
DENND4AQ7Z401 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
DENND4AQ7Z401 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.39■■□□□ 1.5
DENND4AQ7Z401 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
DENND4AQ7Z401 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.38■■□□□ 1.49
DENND4AQ7Z401 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DENND4AQ7Z401 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DENND4AQ7Z401 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DENND4AQ7Z401 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
DENND4AQ7Z401 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DENND4AQ7Z401 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.38■■□□□ 1.49
DENND4AQ7Z401 MIR5787-201ENST00000611784 55 ntBASIC24.38■■□□□ 1.49
DENND4AQ7Z401 AC092666.2-201ENST00000613287 246 ntBASIC24.38■■□□□ 1.49
DENND4AQ7Z401 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.38■■□□□ 1.49
DENND4AQ7Z401 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.37■■□□□ 1.49
DENND4AQ7Z401 AF213884.3-201ENST00000563833 479 ntBASIC24.37■■□□□ 1.49
DENND4AQ7Z401 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.37■■□□□ 1.49
DENND4AQ7Z401 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DENND4AQ7Z401 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
DENND4AQ7Z401 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DENND4AQ7Z401 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.36■■□□□ 1.49
DENND4AQ7Z401 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
DENND4AQ7Z401 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
DENND4AQ7Z401 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DENND4AQ7Z401 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.35■■□□□ 1.49
DENND4AQ7Z401 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DENND4AQ7Z401 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DENND4AQ7Z401 MIR939-201ENST00000401314 82 ntBASIC24.35■■□□□ 1.49
DENND4AQ7Z401 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DENND4AQ7Z401 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
DENND4AQ7Z401 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.35■■□□□ 1.49
DENND4AQ7Z401 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.34■■□□□ 1.49
DENND4AQ7Z401 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.34■■□□□ 1.49
DENND4AQ7Z401 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DENND4AQ7Z401 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
DENND4AQ7Z401 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
DENND4AQ7Z401 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.34■■□□□ 1.49
DENND4AQ7Z401 AC090877.2-201ENST00000558441 1738 ntBASIC24.34■■□□□ 1.49
DENND4AQ7Z401 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DENND4AQ7Z401 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.33■■□□□ 1.49
DENND4AQ7Z401 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DENND4AQ7Z401 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.33■■□□□ 1.49
DENND4AQ7Z401 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
DENND4AQ7Z401 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
DENND4AQ7Z401 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
DENND4AQ7Z401 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.32■■□□□ 1.48
DENND4AQ7Z401 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.32■■□□□ 1.48
DENND4AQ7Z401 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.32■■□□□ 1.48
DENND4AQ7Z401 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DENND4AQ7Z401 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DENND4AQ7Z401 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DENND4AQ7Z401 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.31■■□□□ 1.48
DENND4AQ7Z401 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DENND4AQ7Z401 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.31■■□□□ 1.48
DENND4AQ7Z401 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DENND4AQ7Z401 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DENND4AQ7Z401 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DENND4AQ7Z401 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DENND4AQ7Z401 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
DENND4AQ7Z401 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DENND4AQ7Z401 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
DENND4AQ7Z401 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DENND4AQ7Z401 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
DENND4AQ7Z401 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
DENND4AQ7Z401 AL355001.2-201ENST00000620617 1191 ntBASIC24.29■■□□□ 1.48
DENND4AQ7Z401 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.29■■□□□ 1.48
DENND4AQ7Z401 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DENND4AQ7Z401 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
DENND4AQ7Z401 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
DENND4AQ7Z401 AC096887.2-201ENST00000623443 1957 ntBASIC24.28■■□□□ 1.48
DENND4AQ7Z401 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DENND4AQ7Z401 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
DENND4AQ7Z401 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
DENND4AQ7Z401 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DENND4AQ7Z401 SRD5A1P1-201ENST00000442297 786 ntBASIC24.28■■□□□ 1.48
DENND4AQ7Z401 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
DENND4AQ7Z401 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.28■■□□□ 1.48
DENND4AQ7Z401 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DENND4AQ7Z401 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
DENND4AQ7Z401 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms