Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 AC018755.3-202ENST00000596210 929 ntBASIC26.44■■□□□ 1.82
SHC4Q6S5L8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.44■■□□□ 1.82
SHC4Q6S5L8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
SHC4Q6S5L8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHC4Q6S5L8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
SHC4Q6S5L8 AC087393.1-201ENST00000582896 145 ntBASIC26.42■■□□□ 1.82
SHC4Q6S5L8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHC4Q6S5L8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHC4Q6S5L8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SHC4Q6S5L8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SHC4Q6S5L8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SHC4Q6S5L8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.41■■□□□ 1.82
SHC4Q6S5L8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.41■■□□□ 1.82
SHC4Q6S5L8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.41■■□□□ 1.82
SHC4Q6S5L8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SHC4Q6S5L8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.41■■□□□ 1.82
SHC4Q6S5L8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SHC4Q6S5L8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SHC4Q6S5L8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHC4Q6S5L8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SHC4Q6S5L8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.4■■□□□ 1.82
SHC4Q6S5L8 ABCB10P4-201ENST00000566803 2184 ntBASIC26.4■■□□□ 1.82
SHC4Q6S5L8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHC4Q6S5L8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHC4Q6S5L8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.39■■□□□ 1.82
SHC4Q6S5L8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
SHC4Q6S5L8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SHC4Q6S5L8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.39■■□□□ 1.82
SHC4Q6S5L8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.39■■□□□ 1.82
SHC4Q6S5L8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SHC4Q6S5L8 MIR6765-201ENST00000614092 87 ntBASIC26.39■■□□□ 1.82
SHC4Q6S5L8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
SHC4Q6S5L8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.39■■□□□ 1.82
SHC4Q6S5L8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.39■■□□□ 1.82
SHC4Q6S5L8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.39■■□□□ 1.81
SHC4Q6S5L8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.38■■□□□ 1.81
SHC4Q6S5L8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.38■■□□□ 1.81
SHC4Q6S5L8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHC4Q6S5L8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.38■■□□□ 1.81
SHC4Q6S5L8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.38■■□□□ 1.81
SHC4Q6S5L8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.38■■□□□ 1.81
SHC4Q6S5L8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SHC4Q6S5L8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.38■■□□□ 1.81
SHC4Q6S5L8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SHC4Q6S5L8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SHC4Q6S5L8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SHC4Q6S5L8 AC129492.7-201ENST00000622992 756 ntBASIC26.37■■□□□ 1.81
SHC4Q6S5L8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
SHC4Q6S5L8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.36■■□□□ 1.81
SHC4Q6S5L8 KRT18P60-201ENST00000312876 1297 ntBASIC26.36■■□□□ 1.81
SHC4Q6S5L8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.36■■□□□ 1.81
SHC4Q6S5L8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHC4Q6S5L8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHC4Q6S5L8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHC4Q6S5L8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.36■■□□□ 1.81
SHC4Q6S5L8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHC4Q6S5L8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SHC4Q6S5L8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
SHC4Q6S5L8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
SHC4Q6S5L8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.35■■□□□ 1.81
SHC4Q6S5L8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.35■■□□□ 1.81
SHC4Q6S5L8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SHC4Q6S5L8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.35■■□□□ 1.81
SHC4Q6S5L8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SHC4Q6S5L8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SHC4Q6S5L8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SHC4Q6S5L8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SHC4Q6S5L8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
SHC4Q6S5L8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.34■■□□□ 1.81
SHC4Q6S5L8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SHC4Q6S5L8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
SHC4Q6S5L8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SHC4Q6S5L8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SHC4Q6S5L8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SHC4Q6S5L8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.33■■□□□ 1.81
SHC4Q6S5L8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
SHC4Q6S5L8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHC4Q6S5L8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHC4Q6S5L8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHC4Q6S5L8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHC4Q6S5L8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SHC4Q6S5L8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.32■■□□□ 1.8
SHC4Q6S5L8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SHC4Q6S5L8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SHC4Q6S5L8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.32■■□□□ 1.8
SHC4Q6S5L8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
SHC4Q6S5L8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
SHC4Q6S5L8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
SHC4Q6S5L8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SHC4Q6S5L8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms