Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC3A1Q07837 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC3A1Q07837 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLC3A1Q07837 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC3A1Q07837 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLC3A1Q07837 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC3A1Q07837 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC3A1Q07837 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.83■□□□□ 0.93
SLC3A1Q07837 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC3A1Q07837 SMPD5-203ENST00000639008 1464 ntBASIC20.83■□□□□ 0.93
SLC3A1Q07837 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC3A1Q07837 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC3A1Q07837 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC3A1Q07837 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC3A1Q07837 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC3A1Q07837 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC3A1Q07837 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC3A1Q07837 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC3A1Q07837 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC3A1Q07837 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC3A1Q07837 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC3A1Q07837 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC3A1Q07837 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC3A1Q07837 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SLC3A1Q07837 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC3A1Q07837 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC3A1Q07837 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC3A1Q07837 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC3A1Q07837 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC3A1Q07837 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC3A1Q07837 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SLC3A1Q07837 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC3A1Q07837 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC3A1Q07837 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLC3A1Q07837 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLC3A1Q07837 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
SLC3A1Q07837 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLC3A1Q07837 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC3A1Q07837 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC3A1Q07837 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC3A1Q07837 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC3A1Q07837 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SLC3A1Q07837 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC3A1Q07837 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC3A1Q07837 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SLC3A1Q07837 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
SLC3A1Q07837 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC3A1Q07837 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SLC3A1Q07837 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC3A1Q07837 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC3A1Q07837 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC3A1Q07837 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SLC3A1Q07837 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC3A1Q07837 AC004812.2-201ENST00000611079 2094 ntBASIC20.79■□□□□ 0.92
SLC3A1Q07837 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC3A1Q07837 NTF6A-201ENST00000591175 560 ntBASIC20.79■□□□□ 0.92
SLC3A1Q07837 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC3A1Q07837 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC3A1Q07837 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC3A1Q07837 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC3A1Q07837 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC3A1Q07837 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC3A1Q07837 AC007029.1-201ENST00000604183 313 ntBASIC20.78■□□□□ 0.92
SLC3A1Q07837 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC3A1Q07837 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC3A1Q07837 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC3A1Q07837 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC3A1Q07837 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC3A1Q07837 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC3A1Q07837 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC3A1Q07837 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.77■□□□□ 0.92
SLC3A1Q07837 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC3A1Q07837 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC3A1Q07837 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC3A1Q07837 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC3A1Q07837 DUSP8P5-201ENST00000422884 1815 ntBASIC20.76■□□□□ 0.91
SLC3A1Q07837 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC3A1Q07837 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLC3A1Q07837 AC025884.2-201ENST00000553429 711 ntBASIC20.76■□□□□ 0.91
SLC3A1Q07837 MIR3960-201ENST00000583311 91 ntBASIC20.76■□□□□ 0.91
SLC3A1Q07837 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SLC3A1Q07837 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC3A1Q07837 ABCB10P4-201ENST00000566803 2184 ntBASIC20.75■□□□□ 0.91
SLC3A1Q07837 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC3A1Q07837 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.75■□□□□ 0.91
SLC3A1Q07837 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC3A1Q07837 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SLC3A1Q07837 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC3A1Q07837 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC3A1Q07837 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC3A1Q07837 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SLC3A1Q07837 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC3A1Q07837 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC3A1Q07837 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SLC3A1Q07837 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC3A1Q07837 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC3A1Q07837 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC3A1Q07837 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC3A1Q07837 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC3A1Q07837 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms