Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPCS3P61009 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.86■□□□□ 0.61
SPCS3P61009 SMPD5-203ENST00000639008 1464 ntBASIC18.86■□□□□ 0.61
SPCS3P61009 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPCS3P61009 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPCS3P61009 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.86■□□□□ 0.61
SPCS3P61009 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.86■□□□□ 0.61
SPCS3P61009 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.85■□□□□ 0.61
SPCS3P61009 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.85■□□□□ 0.61
SPCS3P61009 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPCS3P61009 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPCS3P61009 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPCS3P61009 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPCS3P61009 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPCS3P61009 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.84■□□□□ 0.61
SPCS3P61009 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPCS3P61009 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPCS3P61009 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPCS3P61009 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPCS3P61009 AC060814.1-201ENST00000554326 538 ntBASIC18.84■□□□□ 0.61
SPCS3P61009 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SPCS3P61009 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPCS3P61009 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPCS3P61009 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPCS3P61009 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPCS3P61009 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SPCS3P61009 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SPCS3P61009 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPCS3P61009 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.83■□□□□ 0.61
SPCS3P61009 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.83■□□□□ 0.6
SPCS3P61009 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPCS3P61009 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPCS3P61009 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPCS3P61009 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPCS3P61009 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.83■□□□□ 0.6
SPCS3P61009 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SPCS3P61009 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPCS3P61009 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPCS3P61009 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.82■□□□□ 0.6
SPCS3P61009 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SPCS3P61009 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPCS3P61009 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPCS3P61009 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPCS3P61009 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPCS3P61009 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.81■□□□□ 0.6
SPCS3P61009 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPCS3P61009 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPCS3P61009 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.81■□□□□ 0.6
SPCS3P61009 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SPCS3P61009 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPCS3P61009 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SPCS3P61009 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SPCS3P61009 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPCS3P61009 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPCS3P61009 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPCS3P61009 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.8■□□□□ 0.6
SPCS3P61009 AC004812.2-201ENST00000611079 2094 ntBASIC18.8■□□□□ 0.6
SPCS3P61009 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.8■□□□□ 0.6
SPCS3P61009 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPCS3P61009 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.8■□□□□ 0.6
SPCS3P61009 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.8■□□□□ 0.6
SPCS3P61009 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPCS3P61009 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPCS3P61009 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SPCS3P61009 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPCS3P61009 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPCS3P61009 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPCS3P61009 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.79■□□□□ 0.6
SPCS3P61009 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.79■□□□□ 0.6
SPCS3P61009 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.79■□□□□ 0.6
SPCS3P61009 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.78■□□□□ 0.6
SPCS3P61009 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SPCS3P61009 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 AC092296.2-201ENST00000589470 999 ntBASIC18.78■□□□□ 0.6
SPCS3P61009 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPCS3P61009 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SPCS3P61009 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPCS3P61009 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPCS3P61009 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPCS3P61009 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPCS3P61009 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPCS3P61009 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.77■□□□□ 0.6
SPCS3P61009 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPCS3P61009 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.77■□□□□ 0.6
SPCS3P61009 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPCS3P61009 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPCS3P61009 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms